RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 A6NLC8 198 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 ARPC5O15511 151 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 MPC2O95563 127 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 AVPP01185 164 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 CYCSP99999 105 aaKnown RBP14.38□□□□□ -0.11
HOXC6-201ENST00000243108 OPCMLQ14982 345 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 TEX261Q6UWH6 196 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 PLPPR1Q8TBJ4 325 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 PPP1R1CQ8WVI7 109 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 DIRC2Q96SL1 478 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 CABLES2Q9BTV7 478 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 NAA60Q9H7X0 242 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 SLC2A9Q9NRM0 540 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 C1orf123Q9NWV4 160 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 RASL12Q9NYN1 266 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 PRR13Q9NZ81 148 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 COMMD9Q9P000 198 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 GLS2Q9UI32 602 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 U3KQ87 197 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 TEX13DA0A0J9YY54 714 aaPredicted RBP14.38□□□□□ -0.11
HOXC6-201ENST00000243108 FAM25EA8MYX2 175 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 DIRAS3O95661 229 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 CFHR2P36980 270 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 KCNJ3P48549 501 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 ABCA11PQ4W5N1 156 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 C11orf87Q6NUJ2 197 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 C5orf24Q7Z6I8 188 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 OR10Z1Q8NGY1 313 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 ITLN1Q8WWA0 313 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 RAB1CQ92928 201 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 PCDHB10Q9UN67 800 aa14.38□□□□□ -0.11
HOXC6-201ENST00000243108 C5orf51A6NDU8 294 aa14.37□□□□□ -0.11
HOXC6-201ENST00000243108 NPIPB11E5RHQ5 1161 aa14.37□□□□□ -0.11
HOXC6-201ENST00000243108 BET1O15155 118 aa14.37□□□□□ -0.11
HOXC6-201ENST00000243108 ADAP1O75689 374 aa14.37□□□□□ -0.11
HOXC6-201ENST00000243108 RCC1P18754 421 aaPredicted RBP14.37□□□□□ -0.11
HOXC6-201ENST00000243108 S100A11P31949 105 aa14.37□□□□□ -0.11
HOXC6-201ENST00000243108 OR5T2Q8NGG2 359 aa14.37□□□□□ -0.11
HOXC6-201ENST00000243108 OR8H1Q8NGG4 311 aa14.37□□□□□ -0.11
HOXC6-201ENST00000243108 RTN4IP1Q8WWV3 396 aaPredicted RBP14.37□□□□□ -0.11
HOXC6-201ENST00000243108 MBNL3Q9NUK0 354 aaKnown RBP14.37□□□□□ -0.11
HOXC6-201ENST00000243108 TMEM106BQ9NUM4 274 aa14.37□□□□□ -0.11
HOXC6-201ENST00000243108 UFSP2Q9NUQ7 469 aa14.37□□□□□ -0.11
HOXC6-201ENST00000243108 TRBV6-7A0A0A0MS04 114 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 IFNL4K9M1U5 179 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 IGHV2-70P01814 119 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 SRP14P37108 136 aaKnown RBP14.36□□□□□ -0.11
HOXC6-201ENST00000243108 SMIM21Q3B7S5 101 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 TMUB2Q71RG4 321 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 SLC7A5P1Q8MH63 180 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 FAM185AQ8N0U4 392 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 CCDC71LQ8N9Z2 235 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 ZNF680Q8NEM1 530 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 TIMD4Q96H15 378 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 OR2V2Q96R30 315 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 SUCNR1Q9BXA5 334 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 KCNIP3Q9Y2W7 256 aa14.36□□□□□ -0.11
HOXC6-201ENST00000243108 C13orf42A0A1B0GVH6 325 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 RND3P61587 244 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 TMEM187Q14656 261 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 PHLDA2Q53GA4 152 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 ZNF546Q86UE3 836 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 LDLRAD3Q86YD5 345 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 LRTM2Q8N967 370 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 MEGF10Q96KG7 1140 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 SEBOXQ9HB31 216 aaPredicted RBP14.35□□□□□ -0.11
HOXC6-201ENST00000243108 OR14J1Q9UGF5 321 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 IL19Q9UHD0 177 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 TNFSF18Q9UNG2 199 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 TRAV20A0A0B4J274 112 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 hCG_1807616A0A1W2PRN6 198 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 SRRM5B3KS81 715 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 PSPNO60542 156 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 PSMB6P28072 239 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 GNRHRP30968 328 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 CEBPDP49716 269 aaPredicted RBP14.35□□□□□ -0.11
HOXC6-201ENST00000243108 IL15RAQ13261 267 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 FAM90A1Q86YD7 464 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 H1FOOQ8IZA3 346 aaPredicted RBP14.35□□□□□ -0.11
HOXC6-201ENST00000243108 LRRC29Q8WV35 223 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 RAB39BQ96DA2 213 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 C2orf50Q96LR7 162 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 MFFQ9GZY8 342 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 METTL8Q9H825 291 aaKnown RBP14.35□□□□□ -0.11
HOXC6-201ENST00000243108 GCM1Q9NP62 436 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 RDH8Q9NYR8 311 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 TENM1Q9UKZ4 2725 aa14.35□□□□□ -0.11
HOXC6-201ENST00000243108 MPTX1A8MV57 137 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 OR5AC1P0C628 307 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 ZFP36P26651 326 aaKnown RBP14.34□□□□□ -0.11
HOXC6-201ENST00000243108 ZNF345Q14585 488 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 ATXN7L3Q14CW9 347 aaPredicted RBP14.34□□□□□ -0.11
HOXC6-201ENST00000243108 HMGN3Q15651 99 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 LRRC37A5PQ49AS3 106 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 SLC35E4Q6ICL7 350 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 OR11L1Q8NGX0 322 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 OR10C1Q96KK4 312 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 C19orf24Q9BVV8 132 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 PPP1R3CQ9UQK1 317 aa14.34□□□□□ -0.11
HOXC6-201ENST00000243108 LOC105371242A0A075B767 164 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms