RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CLN8Q9UBY8 286 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 JPT1Q9UK76 154 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 LAMP3Q9UQV4 416 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 WNT2P09544 360 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 NDUFB7P17568 137 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 S100GP29377 79 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 CYCSP99999 105 aaKnown RBP12.59□□□□□ -0.39
HDHD3-201ENST00000238379 FGL1Q08830 312 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 IL15RAQ13261 267 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 LTC4SQ16873 150 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 GGNBP1Q5YKI7 109 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 LYZL2Q7Z4W2 148 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 DRAM1Q8N682 238 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 C2orf50Q96LR7 162 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 AGMATQ9BSE5 352 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 KCNS2Q9ULS6 477 aa12.59□□□□□ -0.39
HDHD3-201ENST00000238379 UBE2J1Q9Y385 318 aaPredicted RBP12.59□□□□□ -0.39
HDHD3-201ENST00000238379 HMSDA8MTL9 139 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 H0Y980 276 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 NDUFB3O43676 98 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 YPEL1O60688 119 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 OMGP23515 440 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 UCP1P25874 307 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 SRPXP78539 464 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 MRPS11P82912 194 aaKnown RBP12.58□□□□□ -0.4
HDHD3-201ENST00000238379 MORN2Q502X0 79 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 ZBTB8BQ8NAP8 495 aaPredicted RBP12.58□□□□□ -0.4
HDHD3-201ENST00000238379 NEU4Q8WWR8 484 aaPredicted RBP12.58□□□□□ -0.4
HDHD3-201ENST00000238379 TMEM56Q96MV1 263 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 YPEL2Q96QA6 119 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 RAB9BQ9NP90 201 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 GNG12Q9UBI6 72 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 RALYQ9UKM9 306 aaKnown RBP12.58□□□□□ -0.4
HDHD3-201ENST00000238379 RNF150Q9ULK6 438 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 TMEM56-RWDD3S4R434 201 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 DCHS2Q6V1P9 2916 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 hADV38S2A0JD32 116 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF729A6NN14 1252 aaPredicted RBP12.58□□□□□ -0.4
HDHD3-201ENST00000238379 DVL1O14640 695 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 LY6HO94772 140 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 CDS2O95674 445 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 IFNA21P01568 189 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 MEF2CQ06413 473 aaPredicted RBP12.58□□□□□ -0.4
HDHD3-201ENST00000238379 LRRC37A5PQ49AS3 106 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 OR2D2Q9H210 308 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 UBTD1Q9HAC8 227 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 C19orf12Q9NSK7 152 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 COMMD9Q9P000 198 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 LINC00312Q9Y6C7 94 aa12.58□□□□□ -0.4
HDHD3-201ENST00000238379 FXYD6-FXYD2A0A087WZ82 144 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 MPC2O95563 127 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 IGHV2-70P01814 119 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 SLC25A4P12235 298 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 CXCL2P19875 107 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 MSMO1Q15800 293 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 IAH1Q2TAA2 248 aaPredicted RBP12.57□□□□□ -0.4
HDHD3-201ENST00000238379 LRRC10Q5BKY1 277 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 C11orf87Q6NUJ2 197 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 ZBTB34Q8NCN2 500 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 OR51H1Q8NH63 302 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 C5orf30Q96GV9 206 aa12.57□□□□□ -0.4
HDHD3-201ENST00000238379 KLF2Q9Y5W3 355 aaPredicted RBP12.57□□□□□ -0.4
HDHD3-201ENST00000238379 UBR5O95071 2799 aaPredicted RBP12.56□□□□□ -0.4
HDHD3-201ENST00000238379 ARPC5O15511 151 aa12.56□□□□□ -0.4
HDHD3-201ENST00000238379 B3GALNT1O75752 331 aa12.56□□□□□ -0.4
HDHD3-201ENST00000238379 PSMB6P28072 239 aa12.56□□□□□ -0.4
HDHD3-201ENST00000238379 RPL31P62899 125 aaKnown RBP12.56□□□□□ -0.4
HDHD3-201ENST00000238379 EIF4EBP1Q13541 118 aaPredicted RBP12.56□□□□□ -0.4
HDHD3-201ENST00000238379 SELENOHQ8IZQ5 122 aaKnown RBP12.56□□□□□ -0.4
HDHD3-201ENST00000238379 EDARADDQ8WWZ3 215 aa12.56□□□□□ -0.4
HDHD3-201ENST00000238379 GFOD1Q9NXC2 390 aa12.56□□□□□ -0.4
HDHD3-201ENST00000238379 TAS2R3Q9NYW6 316 aa12.56□□□□□ -0.4
HDHD3-201ENST00000238379 PSG11Q9UQ72 335 aa12.56□□□□□ -0.4
HDHD3-201ENST00000238379 ST8SIA5O15466 376 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 GOSR1O95249 250 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 DAOP14920 347 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF273Q14593 569 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 UTF1Q5T230 341 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 TMEM200BQ69YZ2 307 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 TMEM65Q6PI78 240 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF695Q8IW36 515 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 FAM216AQ8WUB2 273 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 ABHD14BQ96IU4 210 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 GSKIPQ9P0R6 139 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 TMED3Q9Y3Q3 217 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 COL12A1Q99715 3063 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 MMP23AO75900 390 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 SSTR2P30874 369 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF134P52741 427 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 RBPMSQ93062 196 aaKnown RBP12.55□□□□□ -0.4
HDHD3-201ENST00000238379 IL22RA2Q969J5 263 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 RNF126Q9BV68 326 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 IDI2-AS1Q9NZ38 188 aa12.55□□□□□ -0.4
HDHD3-201ENST00000238379 H0YIZ8 118 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 ITGB1BP1O14713 200 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 SNAPC5O75971 98 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 IGHV3-7P01780 117 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms