RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 OR10V1Q8NGI7 309 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 IL1F10Q8WWZ1 152 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 PSMF1Q92530 271 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 ELOVL1Q9BW60 279 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 TP53TG5Q9Y2B4 290 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 LRRC3CA6NJW4 275 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 H7BYZ3 331 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 SPINK2P20155 84 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 CLEC12BQ2HXU8 276 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 PCGF1Q9BSM1 259 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
DDX55-201ENST00000238146 ZNF552Q9H707 407 aaPredicted RBP13.17□□□□□ -0.3
DDX55-201ENST00000238146 PRDM6Q9NQX0 595 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 ZNF705GA8MUZ8 300 aaPredicted RBP13.16□□□□□ -0.3
DDX55-201ENST00000238146 RTP5Q14D33 572 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 ZNF585BQ52M93 769 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 MRPL21Q7Z2W9 205 aaKnown RBP13.16□□□□□ -0.3
DDX55-201ENST00000238146 AGBL5Q8NDL9 886 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 LURAP1Q96LR2 239 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 UBE2L5PA0A1B0GUS4 154 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 HMGB3O15347 200 aaKnown RBP13.16□□□□□ -0.3
DDX55-201ENST00000238146 GCGP01275 180 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 FGF5P12034 268 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 PDLIM4P50479 330 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 NUBP1P53384 320 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 HNF4GQ14541 408 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 USF2Q15853 346 aaPredicted RBP13.16□□□□□ -0.3
DDX55-201ENST00000238146 WIPI1Q5MNZ9 446 aaPredicted RBP13.16□□□□□ -0.3
DDX55-201ENST00000238146 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.16□□□□□ -0.3
DDX55-201ENST00000238146 TMEM170AQ8WVE7 144 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 OR5B12Q96R08 314 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 PPP1R3CQ9UQK1 317 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 C5orf49A4QMS7 147 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 TMEM250H0YL14 139 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 TESK1Q15569 626 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 C9orf135Q5VTT2 229 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 TGIF2LXQ8IUE1 241 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 BEND2Q8NDZ0 799 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 ACY3Q96HD9 319 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 PRRG4Q9BZD6 226 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 PARLQ9H300 379 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 NCKAP5O14513 1909 aa13.16□□□□□ -0.3
DDX55-201ENST00000238146 A0A096LPE4 126 aa13.15□□□□□ -0.3
DDX55-201ENST00000238146 TRAV39A0A0B4J263 110 aa13.15□□□□□ -0.3
DDX55-201ENST00000238146 A0A1W2PPQ1 181 aa13.15□□□□□ -0.3
DDX55-201ENST00000238146 A0A1W2PPZ6 126 aa13.15□□□□□ -0.3
DDX55-201ENST00000238146 EPHA8P29322 1005 aaPredicted RBP13.15□□□□□ -0.3
DDX55-201ENST00000238146 FAM3BP58499 235 aaPredicted RBP13.15□□□□□ -0.3
DDX55-201ENST00000238146 SPCS3P61009 180 aa13.15□□□□□ -0.3
DDX55-201ENST00000238146 ARF1P84077 181 aaKnown RBP13.15□□□□□ -0.3
DDX55-201ENST00000238146 SLC38A11Q08AI6 406 aa13.15□□□□□ -0.3
DDX55-201ENST00000238146 TMEM37Q8WXS4 190 aa13.15□□□□□ -0.3
DDX55-201ENST00000238146 DUSP23Q9BVJ7 150 aa13.15□□□□□ -0.3
DDX55-201ENST00000238146 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.15□□□□□ -0.31
DDX55-201ENST00000238146 CYTIPO60759 359 aa13.15□□□□□ -0.31
DDX55-201ENST00000238146 TRAPPC6AO75865 159 aa13.15□□□□□ -0.31
DDX55-201ENST00000238146 HRASP01112 189 aa13.15□□□□□ -0.31
DDX55-201ENST00000238146 ZNF16P17020 682 aaPredicted RBP13.15□□□□□ -0.31
DDX55-201ENST00000238146 OR8G2PQ6IF36 304 aa13.15□□□□□ -0.31
DDX55-201ENST00000238146 ACSM6Q6P461 480 aa13.15□□□□□ -0.31
DDX55-201ENST00000238146 OR5A2Q8NGI9 324 aa13.15□□□□□ -0.31
DDX55-201ENST00000238146 SGCZQ96LD1 299 aa13.15□□□□□ -0.31
DDX55-201ENST00000238146 STRADBQ9C0K7 418 aa13.15□□□□□ -0.31
DDX55-201ENST00000238146 DLL3Q9NYJ7 618 aa13.15□□□□□ -0.31
DDX55-201ENST00000238146 LRP5LA4QPB2 252 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 NGFP01138 241 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 P04436 131 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 PSMB3P49720 205 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 IDH3GP51553 393 aaPredicted RBP13.14□□□□□ -0.31
DDX55-201ENST00000238146 NRN1LQ496H8 165 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 LINC00596Q86U02 117 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 GATAD1Q8WUU5 269 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 DDA1Q9BW61 102 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 SLC25A22Q9H936 323 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 TMEM9BQ9NQ34 198 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 FUT9Q9Y231 359 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 FREM1Q5H8C1 2179 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 DEGS1O15121 323 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 SLC10A1Q14973 349 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 PRSS8Q16651 343 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 MYPOPQ86VE0 399 aaPredicted RBP13.14□□□□□ -0.31
DDX55-201ENST00000238146 NEU1Q99519 415 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 TIMM9Q9Y5J7 89 aa13.14□□□□□ -0.31
DDX55-201ENST00000238146 ZNF503-AS2A6NEH8 195 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 NPIPB11E5RHQ5 1161 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 ACTL10Q5JWF8 245 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 TMEM14EPQ6UXP3 125 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 APOBEC3DQ96AK3 386 aaPredicted RBP13.13□□□□□ -0.31
DDX55-201ENST00000238146 OR51I2Q9H344 312 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 TNRC6AQ8NDV7 1962 aaKnown RBP13.13□□□□□ -0.31
DDX55-201ENST00000238146 IL11RAQ14626 422 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 TCEAL6Q6IPX3 200 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 FAM58AQ8N1B3 248 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 PRR18Q8N4B5 295 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 OR4F5Q8NH21 305 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 OR4F4Q96R69 305 aa13.13□□□□□ -0.31
DDX55-201ENST00000238146 B4E171 279 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 TCAPO15273 167 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 LILRA1O75019 489 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 GGCTO75223 188 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms