RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 COMMD7Q86VX2 200 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 OR52M1Q8NGK5 317 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 OR1L1Q8NH94 360 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 STOML3Q8TAV4 291 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 PHYHIPLQ96FC7 376 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 PARP12Q9H0J9 701 aaKnown RBP18.85■□□□□ 0.61
CDX1-201ENST00000231656 CBLN4Q9NTU7 201 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 LSM5Q9Y4Y9 91 aaKnown RBP18.85■□□□□ 0.61
CDX1-201ENST00000231656 ARID1AO14497 2285 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 K7EPK0 472 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 HSPA12AO43301 675 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 GOSR1O95249 250 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 CLDN1O95832 211 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 HKR1P10072 659 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 F2RP25116 425 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 SMCO1Q147U7 214 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 KRBOX4Q5JUW0 171 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 ZNF695Q8IW36 515 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 FAM71E2Q8N5Q1 922 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 OR5D13Q8NGL4 314 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 EGLN1Q9GZT9 426 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 SAP30LQ9HAJ7 183 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 PPP1R3CQ9UQK1 317 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 TENM4Q6N022 2769 aa18.84■□□□□ 0.61
CDX1-201ENST00000231656 RAI1Q7Z5J4 1906 aaPredicted RBP18.84■□□□□ 0.61
CDX1-201ENST00000231656 DUXBA0A1W2PPF3 345 aa18.83■□□□□ 0.61
CDX1-201ENST00000231656 SCGB1D2O95969 90 aa18.83■□□□□ 0.61
CDX1-201ENST00000231656 DANCRP0C864 163 aa18.83■□□□□ 0.61
CDX1-201ENST00000231656 S100GP29377 79 aa18.83■□□□□ 0.61
CDX1-201ENST00000231656 CEACAM6P40199 344 aa18.83■□□□□ 0.61
CDX1-201ENST00000231656 OR4D5Q8NGN0 318 aa18.83■□□□□ 0.61
CDX1-201ENST00000231656 Q8TCH9 128 aa18.83■□□□□ 0.61
CDX1-201ENST00000231656 AKR1E2Q96JD6 320 aa18.83■□□□□ 0.61
CDX1-201ENST00000231656 SOD3P08294 240 aa18.83■□□□□ 0.6
CDX1-201ENST00000231656 GABRA2P47869 451 aa18.83■□□□□ 0.6
CDX1-201ENST00000231656 GLIPR1P48060 266 aa18.83■□□□□ 0.6
CDX1-201ENST00000231656 C11orf71Q6IPW1 123 aa18.83■□□□□ 0.6
CDX1-201ENST00000231656 BOLLQ8N9W6 283 aaKnown RBP18.83■□□□□ 0.6
CDX1-201ENST00000231656 IL22RA2Q969J5 263 aa18.83■□□□□ 0.6
CDX1-201ENST00000231656 TOLLIPQ9H0E2 274 aa18.83■□□□□ 0.6
CDX1-201ENST00000231656 IGHV3OR15-7A0A075B7D8 119 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 HBZP02008 142 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 PPOXP50336 477 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 TGIF2LYQ8IUE0 185 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 GALMQ96C23 342 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 CXorf58Q96LI9 332 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 DNTTIP1Q9H147 329 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 SLC25A32Q9H2D1 315 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 MED9Q9NWA0 146 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 RNF7Q9UBF6 113 aa18.82■□□□□ 0.6
CDX1-201ENST00000231656 A1L4Q6 167 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 NMSQ5H8A3 153 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 DTX2Q86UW9 622 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 MRGPRDQ8TDS7 321 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 RBPMSQ93062 196 aaKnown RBP18.81■□□□□ 0.6
CDX1-201ENST00000231656 LURAP1Q96LR2 239 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 UBTD1Q9HAC8 227 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 ZFP57Q9NU63 452 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 CRYBG3Q68DQ2 2970 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 USP9YO00507 2555 aaPredicted RBP18.81■□□□□ 0.6
CDX1-201ENST00000231656 DSCAMO60469 2012 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 OR8U9P0C7N5 309 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 RPL12P30050 165 aaKnown RBP18.81■□□□□ 0.6
CDX1-201ENST00000231656 TPRX1Q8N7U7 411 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 OR13A1Q8NGR1 328 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 OR8U1Q8NH10 309 aa18.81■□□□□ 0.6
CDX1-201ENST00000231656 HELZ2Q9BYK8 2649 aaKnown RBP18.81■□□□□ 0.6
CDX1-201ENST00000231656 TANC2Q9HCD6 1990 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 E5RGE8 158 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 CYB5R3P00387 301 aaPredicted RBP18.8■□□□□ 0.6
CDX1-201ENST00000231656 TPT1P13693 172 aaKnown RBP18.8■□□□□ 0.6
CDX1-201ENST00000231656 IL2RGP31785 369 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 FAM74A1Q5RGS3 127 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 OR52L2PQ8NGH6 319 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 SNX22Q96L94 193 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 SPIN2AQ99865 258 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 SPIN2BQ9BPZ2 258 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 NSG2Q9Y328 171 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 AKAP6Q13023 2319 aa18.8■□□□□ 0.6
CDX1-201ENST00000231656 ST8SIA3O43173 380 aa18.79■□□□□ 0.6
CDX1-201ENST00000231656 VDAC1P21796 283 aa18.79■□□□□ 0.6
CDX1-201ENST00000231656 PDZD9Q8IXQ8 264 aa18.79■□□□□ 0.6
CDX1-201ENST00000231656 OR51H1Q8NH63 302 aa18.79■□□□□ 0.6
CDX1-201ENST00000231656 PLEKHA2Q9HB19 425 aa18.79■□□□□ 0.6
CDX1-201ENST00000231656 DCAF16Q9NXF7 216 aa18.79■□□□□ 0.6
CDX1-201ENST00000231656 KCNS2Q9ULS6 477 aa18.79■□□□□ 0.6
CDX1-201ENST00000231656 LAMP3Q9UQV4 416 aa18.79■□□□□ 0.6
CDX1-201ENST00000231656 POMT1Q9Y6A1 747 aa18.79■□□□□ 0.6
CDX1-201ENST00000231656 ADAM20O43506 726 aa18.78■□□□□ 0.6
CDX1-201ENST00000231656 IRF2P14316 349 aa18.78■□□□□ 0.6
CDX1-201ENST00000231656 CD80P33681 288 aa18.78■□□□□ 0.6
CDX1-201ENST00000231656 GNMTQ14749 295 aa18.78■□□□□ 0.6
CDX1-201ENST00000231656 SP5Q6BEB4 398 aaPredicted RBP18.78■□□□□ 0.6
CDX1-201ENST00000231656 DRAM1Q8N682 238 aa18.78■□□□□ 0.6
CDX1-201ENST00000231656 ANGPTL6Q8NI99 470 aa18.78■□□□□ 0.6
CDX1-201ENST00000231656 REG4Q9BYZ8 158 aa18.78■□□□□ 0.6
CDX1-201ENST00000231656 RBM7Q9Y580 266 aaKnown RBP18.78■□□□□ 0.6
CDX1-201ENST00000231656 C15orf65H3BRN8 121 aa18.78■□□□□ 0.6
CDX1-201ENST00000231656 TAAR5O14804 337 aa18.78■□□□□ 0.6
CDX1-201ENST00000231656 MGST3O14880 152 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms