RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 POLEQ07864 2286 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 SLC22A20A6NK97 555 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 P04436 131 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 IGHV4-34P06331 123 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 CDC34P49427 236 aaPredicted RBP12.5□□□□□ -0.41
PRDM4-201ENST00000228437 RBM11P57052 281 aaKnown RBP12.5□□□□□ -0.41
PRDM4-201ENST00000228437 IGFBP7Q16270 282 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 OR4D5Q8NGN0 318 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 CPT1CQ8TCG5 803 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 GABRG3Q99928 467 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 G6PCP35575 357 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 SPACA9Q96E40 222 aaPredicted RBP12.5□□□□□ -0.41
PRDM4-201ENST00000228437 UHRF2Q96PU4 802 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 RPH3ALQ9UNE2 315 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 SELENOKQ9Y6D0 94 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 SNURFLB1AK76 121 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 PGLYRP1O75594 196 aaPredicted RBP12.49□□□□□ -0.41
PRDM4-201ENST00000228437 GDF1P27539 372 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 CEACAM6P40199 344 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 MRPS21P82921 87 aaKnown RBP12.49□□□□□ -0.41
PRDM4-201ENST00000228437 PRDX4Q13162 271 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 H2BFWTQ7Z2G1 175 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 CXorf67Q86X51 503 aaPredicted RBP12.49□□□□□ -0.41
PRDM4-201ENST00000228437 ANGPTL4Q9BY76 406 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 IGHV3-43A0A0B4J1X8 118 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 NXPH2O95156 264 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 IGHV3-43DP0DP04 118 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 CFPP27918 469 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 MRPL54Q6P161 138 aaKnown RBP12.49□□□□□ -0.41
PRDM4-201ENST00000228437 ANKRD37Q7Z713 158 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 WNT10AQ9GZT5 417 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 FBLN5Q9UBX5 448 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 VCANP13611 3396 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 IGKV1-12A0A0C4DH73 117 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 DLEU1O43261 78 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 GALR2O43603 387 aaPredicted RBP12.49□□□□□ -0.41
PRDM4-201ENST00000228437 KBTBD11O94819 623 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 IGKV1D-12P01611 117 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 IGHMP01871 453 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 CA6P23280 308 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 GCH1P30793 250 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 RAB7AP51149 207 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 SSMEM1Q8WWF3 244 aa12.49□□□□□ -0.41
PRDM4-201ENST00000228437 TAF15Q92804 592 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRDM4-201ENST00000228437 DIRC3C9JPN6 131 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 C17orf112F2Z3M2 114 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 CHRNB4P30926 498 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 HOXA6P31267 233 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 EDDM3AQ14507 147 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 ACY3Q96HD9 319 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 OR1A1Q9P1Q5 309 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 ZNF253O75346 499 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 GABRA2P47869 451 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 TM2D1Q9BX74 207 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 MRPL13Q9BYD1 178 aaKnown RBP12.48□□□□□ -0.41
PRDM4-201ENST00000228437 IGKV1-27A0A075B6S5 117 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 SLC17A3O00476 420 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 RRP8O43159 456 aaKnown RBP12.48□□□□□ -0.41
PRDM4-201ENST00000228437 CTXN2P0C2S0 81 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 SELEP16581 610 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 GZMHP20718 246 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 RAB35Q15286 201 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 COL5A1-AS1Q5SY13 56 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 TMEM211Q6ICI0 200 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 TECTBQ96PL2 329 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 RASL10BQ96S79 203 aa12.48□□□□□ -0.41
PRDM4-201ENST00000228437 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
PRDM4-201ENST00000228437 CEACAM18A8MTB9 384 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 M0QZK8 103 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 GGCTO75223 188 aaKnown RBP12.47□□□□□ -0.41
PRDM4-201ENST00000228437 SYNGR4O95473 234 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 PCBD1P61457 104 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 PRR31Q5SQ13 230 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 CADM4Q8NFZ8 388 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 DIRC2Q96SL1 478 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 A0A0U1RQV5 110 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 SUMO3P55854 103 aaPredicted RBP12.47□□□□□ -0.41
PRDM4-201ENST00000228437 MMDQ15546 238 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 C9orf50Q5SZB4 431 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 PRR27Q6MZM9 219 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 OR10G8Q8NGN5 311 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 LYPD6BQ8NI32 183 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 ANAPC16Q96DE5 110 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 MMP17Q9ULZ9 603 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 TRBV24-1A0A075B6N3 115 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 IGHV1OR21-1A0A087WYE8 117 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 PRR19A6NJB7 356 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 SYNGR1O43759 233 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 ZIC3O60481 467 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 SHHQ15465 462 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 HES3Q5TGS1 186 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 C12orf49Q9H741 205 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 ENY2Q9NPA8 101 aa12.47□□□□□ -0.41
PRDM4-201ENST00000228437 A0A0G2JRQ6 117 aa12.46□□□□□ -0.41
PRDM4-201ENST00000228437 IL3RAP26951 378 aa12.46□□□□□ -0.41
PRDM4-201ENST00000228437 WIPI1Q5MNZ9 446 aaPredicted RBP12.46□□□□□ -0.41
PRDM4-201ENST00000228437 CYP2G1PQ6ZSU1 146 aa12.46□□□□□ -0.41
PRDM4-201ENST00000228437 OR1L6Q8NGR2 347 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms