RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PSG9Q00887 426 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 Q56UQ5 140 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 FNDC7Q5VTL7 733 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 TMEM183AQ8IXX5 376 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 GBGT1Q8N5D6 347 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 MBD1Q9UIS9 605 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 DOPEY2Q9Y3R5 2298 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 CUL9Q8IWT3 2517 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 IGHV3-15A0A0B4J1V0 119 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 FAM221AA4D161 298 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 FABP2P12104 132 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 MEOX1P50221 254 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 POLR2GP62487 172 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHD9-201ENST00000219084 HYAL1Q12794 435 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 SRSF7Q16629 238 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHD9-201ENST00000219084 CBLN2Q8IUK8 224 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 GVQW1Q8N7I0 195 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 PATE1Q8WXA2 126 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 ZNF665Q9H7R5 613 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 GPR35Q9HC97 309 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 ZMIZ1Q9ULJ6 1067 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 TNRC6AQ8NDV7 1962 aaKnown RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 FAM90A9PA6NNJ1 464 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 K7N7A8 449 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 PPM1DO15297 605 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 ACAA1P09110 424 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 ATP6V0CP27449 155 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 PTGDSP41222 190 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 LSM11P83369 360 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHD9-201ENST00000219084 JOSD1Q15040 202 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 LYG1Q8N1E2 194 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 CYB561D1Q8N8Q1 229 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 OR2M3Q8NG83 312 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 SFRP2Q96HF1 295 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 TRAV30A0A087WSZ9 112 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 H3BP45 60 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 NEURL1O76050 574 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 CT62P0C5K7 136 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 TNFSF10P50591 281 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 OR2B11Q5JQS5 317 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 OR4A47Q6IF82 309 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 ACSM6Q6P461 480 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 OR1B1Q8NGR6 318 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 MISP3Q96FF7 219 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 KCNK7Q9Y2U2 307 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 NKX2-6A6NCS4 301 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 ZNF253O75346 499 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 CD160O95971 181 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 VSIG10L2P0DP72 767 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 COL8A1P27658 744 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 ID1P41134 155 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 MLF1P58340 268 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 CD300CQ08708 224 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 Q6AWC8 147 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 FAM90A1Q86YD7 464 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 LRRC29Q8WV35 223 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 C8orf44Q96CB5 159 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 FLYWCH2Q96CP2 140 aaKnown RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 KCNK17Q96T54 332 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 CDX2Q99626 313 aaPredicted RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 FBLN5Q9UBX5 448 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 RTTNQ86VV8 2226 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 SOCS1O15524 211 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 IGHV3-9P01782 118 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 RBP4P02753 201 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 IGLV3-21P80748 117 aaPredicted RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 ZNF260Q3ZCT1 412 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 C10orf128Q5T292 105 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 FBXW9Q5XUX1 488 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 VWA1Q6PCB0 445 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 STPG3Q8N7X2 389 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 TM2D1Q9BX74 207 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 PLSCR2Q9NRY7 297 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 ANKRD10Q9NXR5 420 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 FUT9Q9Y231 359 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 MRPS16Q9Y3D3 137 aaKnown RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 HKR1P10072 659 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 MRPS11P82912 194 aaKnown RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 TUSC1Q2TAM9 212 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 MOB3BQ86TA1 216 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 SP7Q8TDD2 431 aaPredicted RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 RAB1CQ92928 201 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 RSRP1Q9BUV0 290 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 ELOVL1Q9BW60 279 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 DDA1Q9BW61 102 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 CRISPLD2Q9H0B8 497 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 HIGD1AQ9Y241 93 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 OR51B2Q9Y5P1 312 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 IGHV1OR15-9A0A0B4J2B8 117 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 A0A1B0GW64 132 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 FOLR2P14207 255 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 FGF8P55075 233 aaPredicted RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 ANKRD39Q53RE8 183 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 FHL5Q5TD97 284 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 OR8B3Q8NGG8 313 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 Q8WTZ3 238 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 OR8B2Q96RD0 313 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 ABHD14AQ9BUJ0 271 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms