RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CD40LGP29965 261 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 INPP1P49441 399 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 UBE2E1P51965 193 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 ZNF57Q68EA5 555 aaPredicted RBP22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 FAAP20Q6NZ36 180 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 STEAP1BQ6NZ63 245 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 BRD3OSQ6XYD6 125 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 OVCH2Q7RTZ1 564 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 H1FOOQ8IZA3 346 aaPredicted RBP22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 TOMM5Q8N4H5 51 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 OR11H6Q8NGC7 330 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 NANPQ8TBE9 248 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 CCDC32Q9BV29 185 aa22.19■■□□□ 1.14
CHMP4B-201ENST00000217402 IGHV1-69DA0A0B4J2H0 117 aa22.18■■□□□ 1.14
CHMP4B-201ENST00000217402 RAB3DO95716 219 aa22.18■■□□□ 1.14
CHMP4B-201ENST00000217402 IGHV1-69P01742 117 aa22.18■■□□□ 1.14
CHMP4B-201ENST00000217402 ZNF134P52741 427 aa22.18■■□□□ 1.14
CHMP4B-201ENST00000217402 ZNF439Q8NDP4 499 aa22.18■■□□□ 1.14
CHMP4B-201ENST00000217402 OR2AK2Q8NG84 335 aa22.18■■□□□ 1.14
CHMP4B-201ENST00000217402 J3QR06 171 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 CD74P04233 296 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 TBPP20226 339 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 FCGR2CP31995 323 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 DYRK1AQ13627 763 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 KLF9Q13886 244 aaPredicted RBP22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 CT45A1Q5HYN5 189 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 ZNF626Q68DY1 528 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 CT45A3Q8NHU0 189 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 ABHD14AQ9BUJ0 271 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 SONP18583 2426 aaKnown RBP22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 ODF3BA8MYP8 253 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 ST8SIA5O15466 376 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 AKAIN1P0CW23 69 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 PRRX1P54821 245 aa22.17■■□□□ 1.14
CHMP4B-201ENST00000217402 LINC00854A0A1B0GVQ3 168 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 FSHBP01225 129 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 HNF1AP20823 631 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 AP3S2P59780 193 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 TSPAN5P62079 268 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 Q3ZCU0 254 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 VAX1Q5SQQ9 334 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 SLC25A48Q6ZT89 311 aaKnown RBP22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 OR4C16Q8NGL9 310 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 OR10X1Q8NGY0 326 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 ZNF596Q8TC21 504 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 EDARADDQ8WWZ3 215 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 C11orf54Q9H0W9 315 aaPredicted RBP22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 MMP28Q9H239 520 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 ABCB10Q9NRK6 738 aa22.16■■□□□ 1.14
CHMP4B-201ENST00000217402 NPFFO15130 113 aa22.15■■□□□ 1.14
CHMP4B-201ENST00000217402 IGLV1-47P01700 117 aa22.15■■□□□ 1.14
CHMP4B-201ENST00000217402 IFNA6P05013 189 aa22.15■■□□□ 1.14
CHMP4B-201ENST00000217402 HLA-DRB5Q30154 266 aa22.15■■□□□ 1.14
CHMP4B-201ENST00000217402 PIP4P2Q8N4L2 257 aa22.15■■□□□ 1.14
CHMP4B-201ENST00000217402 BEND2Q8NDZ0 799 aa22.15■■□□□ 1.14
CHMP4B-201ENST00000217402 OR4P4Q8NGL7 312 aa22.15■■□□□ 1.14
CHMP4B-201ENST00000217402 TOLLIPQ9H0E2 274 aa22.15■■□□□ 1.14
CHMP4B-201ENST00000217402 AMY2AP04746 511 aa22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 AADACP22760 399 aa22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 SAA4P35542 130 aa22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 SRP14P37108 136 aaKnown RBP22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 TEX29Q8N6K0 151 aa22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 OR56B4Q8NH76 319 aa22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 ZNF2Q9BSG1 426 aaPredicted RBP22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 TMEM160Q9NX00 188 aa22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 NUP50Q9UKX7 468 aa22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 RBM7Q9Y580 266 aaKnown RBP22.14■■□□□ 1.14
CHMP4B-201ENST00000217402 HIVEP2P31629 2446 aa22.14■■□□□ 1.13
CHMP4B-201ENST00000217402 OR8U9P0C7N5 309 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 LGALS4P56470 323 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 MEF2DQ14814 521 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 LY6G6FQ5SQ64 297 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 LHFPL4Q7Z7J7 247 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 C8orf31Q8N9H6 132 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 OR8U1Q8NH10 309 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 SLC6A7Q99884 636 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 IFI27L2Q9H2X8 130 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 MCUBQ9NWR8 336 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 RNF150Q9ULK6 438 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 OR2W1Q9Y3N9 320 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 TUSC2O75896 110 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 FXYD4P59646 89 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 LYG1Q8N1E2 194 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 LINC00311Q8N616 119 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 OR6F1Q8NGZ6 308 aa22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 SOX21Q9Y651 276 aaPredicted RBP22.13■■□□□ 1.13
CHMP4B-201ENST00000217402 INAFM1C9JVW0 142 aa22.12■■□□□ 1.13
CHMP4B-201ENST00000217402 PPYP01298 95 aa22.12■■□□□ 1.13
CHMP4B-201ENST00000217402 LDLRAD2Q5SZI1 272 aa22.12■■□□□ 1.13
CHMP4B-201ENST00000217402 ZNF660Q6AZW8 331 aaPredicted RBP22.12■■□□□ 1.13
CHMP4B-201ENST00000217402 C17orf50Q8WW18 174 aa22.12■■□□□ 1.13
CHMP4B-201ENST00000217402 GIMAP1Q8WWP7 306 aa22.12■■□□□ 1.13
CHMP4B-201ENST00000217402 C22orf15Q8WYQ4 148 aa22.12■■□□□ 1.13
CHMP4B-201ENST00000217402 ABHD14BQ96IU4 210 aa22.12■■□□□ 1.13
CHMP4B-201ENST00000217402 HRASLSQ9HDD0 168 aa22.12■■□□□ 1.13
CHMP4B-201ENST00000217402 IGKV1D-13A0A0B4J2D9 117 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 BUB1B-PAK6H3BSN5 160 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 UPK1BO75841 260 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 IGKV1-13P0DP09 117 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 EPHA1P21709 976 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms