RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TMEM56-RWDD3S4R434 201 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 OGG1O15527 345 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 AMY1AP04745 511 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 CKS2P33552 79 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF117Q03924 483 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 MMD2Q8IY49 270 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 MISP3Q96FF7 219 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 AICDAQ9GZX7 198 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 CACNG4Q9UBN1 327 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 CD1BP29016 333 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 XAF1Q6GPH4 301 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 NKAIN4Q8IVV8 208 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 GCSAMQ8N6F7 178 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 SGK494Q96LW2 274 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 TBC1D29Q9UFV1 150 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 LIPGQ9Y5X9 500 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 SPTY2D1-AS1A0A0U1RR47 76 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 A6NIN4 97 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 SRSF10O75494 262 aaKnown RBP5.35□□□□□ -1.55
VPS13D-201ENST00000011700 TNFSF15O95150 251 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 IL4P05112 153 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 LTC4SQ16873 150 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 OR2B11Q5JQS5 317 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 C1QTNF9BB2RNN3 333 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 PLPP3O14495 311 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 PPBPP02775 128 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 MEF2CQ06413 473 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-201ENST00000011700 GFRALQ6UXV0 394 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 DNAJB12Q9NXW2 375 aaKnown RBP5.35□□□□□ -1.55
VPS13D-201ENST00000011700 TUBD1Q9UJT1 453 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 LOXL2Q9Y4K0 774 aa5.35□□□□□ -1.55
VPS13D-201ENST00000011700 KBTBD11-OT1A0A1B0GTJ5 212 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 IFITM10A6NMD0 228 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 CST7O76096 145 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ONECUT2O95948 504 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 DYNLT3P51808 116 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 CEACAM16Q2WEN9 425 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 SH2D5Q6ZV89 423 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 FAM90A1Q86YD7 464 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 H3BQ15 152 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 FGF17O60258 216 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 AVPR2P30518 371 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 WIPI1Q5MNZ9 446 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-201ENST00000011700 HES3Q5TGS1 186 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 DYNLRB2Q8TF09 96 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 CNTD2Q9H8S5 307 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 TM4SF5O14894 197 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 HYPMO75409 117 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 PAX1P15863 534 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 RHBDD2Q6NTF9 364 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF645Q8N7E2 425 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ASB10Q8WXI3 467 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 CXCL16Q9H2A7 254 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ADAP1O75689 374 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ACAA2P42765 397 aaKnown RBP5.34□□□□□ -1.55
VPS13D-201ENST00000011700 CCL11P51671 97 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 AGERQ15109 404 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF658BQ4V348 819 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-201ENST00000011700 C9orf152Q5JTZ5 239 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 SHISA6Q6ZSJ9 500 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 DTX2Q86UW9 622 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 HIST1H4GQ99525 98 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 CISD1Q9NZ45 108 aaKnown RBP5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ZMIZ1Q9ULJ6 1067 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 CD3EP07766 207 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 AESQ08117 197 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 HMGN2P46Q86SG4 172 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 RNF133Q8WVZ7 376 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 PKIGQ9Y2B9 76 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 TNFSF14O43557 240 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 IAPPP10997 89 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 MESTQ5EB52 335 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 IBA57Q5T440 356 aaKnown RBP5.34□□□□□ -1.55
VPS13D-201ENST00000011700 RASL11AQ6T310 242 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 C1orf210Q8IVY1 113 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ADAMTS17Q8TE56 1095 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 HARBI1Q96MB7 349 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF576Q9H609 170 aa5.34□□□□□ -1.55
VPS13D-201ENST00000011700 LOC390937A0A1W2PQ73 354 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 RPL8P62917 257 aaKnown RBP5.34□□□□□ -1.56
VPS13D-201ENST00000011700 B4GALNT1Q00973 533 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 MAMSTRQ6ZN01 415 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 DNM1P46Q6ZS02 220 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 OR5A1Q8NGJ0 315 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM222Q9H0R3 208 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 SH3BGRL2Q9UJC5 107 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 PTPRBP23467 1997 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 PRICKLE4Q2TBC4 344 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 TGIF2LYQ8IUE0 185 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 FAM24BQ8N5W8 94 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 OR13H1Q8NG92 308 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 LOXL4Q96JB6 756 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 PAAF1Q9BRP4 392 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 GEMIN7Q9H840 131 aaKnown RBP5.34□□□□□ -1.56
VPS13D-201ENST00000011700 WNT16Q9UBV4 365 aa5.34□□□□□ -1.56
VPS13D-201ENST00000011700 RBM45Q8IUH3 476 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM99Q8N816 258 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 DTD1Q8TEA8 209 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 RARRES2Q99969 163 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms