RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 DNASE2BQ8WZ79 361 aa8.98□□□□□ -0.97
CX3CL1-201ENST00000006053 IMMP1LQ96LU5 166 aa8.98□□□□□ -0.97
CX3CL1-201ENST00000006053 FGF23Q9GZV9 251 aaPredicted RBP8.98□□□□□ -0.97
CX3CL1-201ENST00000006053 MTCH1Q9NZJ7 389 aa8.98□□□□□ -0.97
CX3CL1-201ENST00000006053 SVILO95425 2214 aa8.98□□□□□ -0.97
CX3CL1-201ENST00000006053 DUXBA0A1W2PPF3 345 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 C9J4A7 227 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 HMGB3O15347 200 aaKnown RBP8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 SYNGR1O43759 233 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 FGF12P61328 243 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 DCAF10Q5QP82 559 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 WDR25Q64LD2 544 aaPredicted RBP8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 C20orf204Q6ZNR8 217 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 MRPL21Q7Z2W9 205 aaKnown RBP8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 MKXQ8IYA7 352 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 OR1K1Q8NGR3 316 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 PSENENQ9NZ42 101 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 CISD1Q9NZ45 108 aaKnown RBP8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 TCFL5Q9UL49 500 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 MRPS17Q9Y2R5 130 aaKnown RBP8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 ATP23Q9Y6H3 246 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 C5orf49A4QMS7 147 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 CD300LBA8K4G0 201 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 TUSC2O75896 110 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 P04436 131 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 GZMBP10144 247 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 ARL16Q0P5N6 197 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 GAGE1Q13065 139 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 ZNF726P1Q15940 193 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 DPPA3Q6W0C5 159 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 OR2V1Q8NHB1 315 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 M1APQ8TC57 530 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 HIST1H2BLQ99880 126 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 SDF2L1Q9HCN8 221 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 SIT1Q9Y3P8 196 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 NXPH2O95156 264 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 CD55P08174 381 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 B3GALT5-AS1P59052 145 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 PNRC1Q12796 327 aaPredicted RBP8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 GGNQ86UU5 652 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 ZNF295-AS1Q8N0V1 137 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 RCC1LQ96I51 464 aaKnown RBP8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 TECTBQ96PL2 329 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 PPP1R3CQ9UQK1 317 aa8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 DIDO1Q9BTC0 2240 aaKnown RBP8.97□□□□□ -0.97
CX3CL1-201ENST00000006053 FREM1Q5H8C1 2179 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 LOC102723996A0A087X1L8 192 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 LY6G6EA0A0G2JKS1 128 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 PAX1P15863 534 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 EPHA8P29322 1005 aaPredicted RBP8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 CXCL12P48061 93 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 SRYQ05066 204 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 KRTAP27-1Q3LI81 207 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 SPANXN5Q5MJ07 72 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 ZDHHC23Q8IYP9 409 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 PSMF1Q92530 271 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 RAB40CQ96S21 281 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 DNAJC4Q9NNZ3 241 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 RNF24Q9Y225 148 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 U3KQA8 63 aa8.96□□□□□ -0.97
CX3CL1-201ENST00000006053 CEP192Q8TEP8 1941 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 SYNGR2O43760 224 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 CTXN2P0C2S0 81 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 CCL4P13236 92 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 ZFP36L1Q07352 338 aaKnown RBP8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 JOSD1Q15040 202 aaPredicted RBP8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 IGFBP7Q16270 282 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 DNLZQ5SXM8 178 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 CLDN23Q96B33 292 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 HIST1H2AAQ96QV6 131 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 SMIM7Q9BQ49 75 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 DUSP23Q9BVJ7 150 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 C1QTNF5Q9BXJ0 243 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 RBKSQ9H477 322 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 KCNS2Q9ULS6 477 aa8.96□□□□□ -0.98
CX3CL1-201ENST00000006053 BDP1A6H8Y1 2624 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 TRAV1-1A0A0B4J248 108 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 MAP1LC3B2A6NCE7 125 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 SRD5A2P31213 254 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 MDH2P40926 338 aaKnown RBP8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 RND2P52198 227 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 MLF1P58340 268 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 ARF1P84077 181 aaKnown RBP8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 TESK1Q15569 626 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 HLA-BQ31612 363 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 PCSK4Q6UW60 755 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 BTNL3Q6UXE8 466 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 Q6ZS49 121 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 OR10A7Q8NGE5 316 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 SGCZQ96LD1 299 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 MAP1LC3BQ9GZQ8 125 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 OR1A1Q9P1Q5 309 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 LAMP3Q9UQV4 416 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 OR2W1Q9Y3N9 320 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 CHTOPQ9Y3Y2 248 aaKnown RBP8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 CHD3Q12873 2000 aaKnown RBP8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 A0A1W2PPQ1 181 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 A6NJY4 79 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 J3QW42 95 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms