RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 INTS12Q96CB8 462 aaKnown RBP9.02□□□□□ -0.96
USP28-201ENST00000003302 PRDM14Q9GZV8 571 aa9.02□□□□□ -0.96
USP28-201ENST00000003302 DEFB127Q9H1M4 99 aa9.02□□□□□ -0.96
USP28-201ENST00000003302 PRO3102Q9H379 93 aa9.02□□□□□ -0.96
USP28-201ENST00000003302 DEFB108AA8MXU0 73 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 EIF2S3P41091 472 aaKnown RBP9.02□□□□□ -0.97
USP28-201ENST00000003302 ECI1P42126 302 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 VAMP2P63027 116 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 GAMTQ14353 236 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 OR4C12Q96R67 309 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 OR2J1Q9GZK6 312 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 CLN8Q9UBY8 286 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 KRASP01116 189 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 TDGF1P13385 188 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 DMRTC2Q8IXT2 367 aaPredicted RBP9.02□□□□□ -0.97
USP28-201ENST00000003302 OR51G1Q8NGK1 321 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 RFESDQ8TAC1 157 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 CA5BP1Q8WTZ4 195 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 TTTY12Q9BZ98 90 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 KIAA1456Q9P272 454 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 MED13LQ71F56 2210 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 UBE2L5PA0A1B0GUS4 154 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 ZNF816Q0VGE8 651 aaPredicted RBP9.02□□□□□ -0.97
USP28-201ENST00000003302 ACSM6Q6P461 480 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 PLK3Q9H4B4 646 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 SLC25A22Q9H936 323 aa9.02□□□□□ -0.97
USP28-201ENST00000003302 SS18L1O75177 396 aaPredicted RBP9.01□□□□□ -0.97
USP28-201ENST00000003302 CD33P20138 364 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 HOXA5P20719 270 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 G6PCP35575 357 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 RHEBQ15382 184 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 LTC4SQ16873 150 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 RIPPLY2Q5TAB7 128 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 Q6P435 159 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 OR5T1Q8NG75 326 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 OR1L1Q8NH94 360 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 LOXL2Q9Y4K0 774 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 TRAPPC2LH3BP13 241 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 FABP4P15090 132 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 TFF3Q07654 80 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 MDP1Q86V88 176 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 ZNF525Q8N782 197 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 OR51M1Q9H341 326 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 KCNS2Q9ULS6 477 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 APC2O95996 2303 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 OR2H2O95918 312 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 TAS2R30P59541 319 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 CD81P60033 236 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 CCDC71LQ8N9Z2 235 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 OR10V1Q8NGI7 309 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 ATP5SQ99766 215 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 OR2W1Q9Y3N9 320 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 GRPP07492 148 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 NPPCP23582 126 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 CD200P41217 278 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 ZNF266Q14584 549 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 SPRNQ5BIV9 151 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 H1FOOQ8IZA3 346 aaPredicted RBP9.01□□□□□ -0.97
USP28-201ENST00000003302 OR52L2PQ8NGH6 319 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 DERL1Q9BUN8 251 aa9.01□□□□□ -0.97
USP28-201ENST00000003302 LYZL6O75951 148 aa9□□□□□ -0.97
USP28-201ENST00000003302 NR2C1P13056 603 aa9□□□□□ -0.97
USP28-201ENST00000003302 AKR1C8PQ5T2L2 129 aa9□□□□□ -0.97
USP28-201ENST00000003302 RTL6Q6ICC9 239 aa9□□□□□ -0.97
USP28-201ENST00000003302 DRAM1Q8N682 238 aa9□□□□□ -0.97
USP28-201ENST00000003302 TOLLIPQ9H0E2 274 aa9□□□□□ -0.97
USP28-201ENST00000003302 PTPRZ1P23471 2315 aaPredicted RBP9□□□□□ -0.97
USP28-201ENST00000003302 LOC102723971A0A1B0GUV8 181 aa9□□□□□ -0.97
USP28-201ENST00000003302 C1QTNF9BB2RNN3 333 aa9□□□□□ -0.97
USP28-201ENST00000003302 SSTR5P35346 364 aa9□□□□□ -0.97
USP28-201ENST00000003302 VKORC1L1Q8N0U8 176 aa9□□□□□ -0.97
USP28-201ENST00000003302 OR10J5Q8NHC4 309 aa9□□□□□ -0.97
USP28-201ENST00000003302 ABHD14BQ96IU4 210 aa9□□□□□ -0.97
USP28-201ENST00000003302 STRAPQ9Y3F4 350 aaKnown RBP9□□□□□ -0.97
USP28-201ENST00000003302 CLEC18AA5D8T8 446 aa9□□□□□ -0.97
USP28-201ENST00000003302 GPX4P36969 197 aaPredicted RBP9□□□□□ -0.97
USP28-201ENST00000003302 AESQ08117 197 aa9□□□□□ -0.97
USP28-201ENST00000003302 P2RY6Q15077 328 aa9□□□□□ -0.97
USP28-201ENST00000003302 ZNF506Q5JVG8 444 aa9□□□□□ -0.97
USP28-201ENST00000003302 FAM58AQ8N1B3 248 aa9□□□□□ -0.97
USP28-201ENST00000003302 CLEC18CQ8NCF0 446 aa9□□□□□ -0.97
USP28-201ENST00000003302 RPUSD4Q96CM3 377 aaKnown RBP9□□□□□ -0.97
USP28-201ENST00000003302 MALSU1Q96EH3 234 aa9□□□□□ -0.97
USP28-201ENST00000003302 AGFG2O95081 481 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 FRMD6-AS1P0C7T7 363 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 RNF224P0DH78 156 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 FKBP2P26885 142 aaKnown RBP8.99□□□□□ -0.97
USP28-201ENST00000003302 MPV17P39210 176 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 CACNA1BQ00975 2339 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 OR1C1Q15619 314 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 HIST3H2BBQ8N257 126 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 OR5D13Q8NGL4 314 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 PBDC1Q9BVG4 233 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 HRNRQ86YZ3 2850 aaPredicted RBP8.99□□□□□ -0.97
USP28-201ENST00000003302 CEBPZOSA8MTT3 80 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 H0Y980 276 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 SERPINE2P07093 398 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 CEACAM6P40199 344 aa8.99□□□□□ -0.97
USP28-201ENST00000003302 PMELP40967 661 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms