RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Fam53aE9PV82 402 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Onecut1O08755 465 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Adra2cQ01337 458 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr324Q5NCC7 333 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 AI987944Q7TPX5 406 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr890Q7TRD9 314 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Lrtm2Q8BGX3 370 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 TprkbQ8QZZ7 175 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Glo1Q9CPU0 184 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Fdx2Q9CPW2 174 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Timm9Q9WV98 89 aaKnown RBP10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1291-ps1A0A286YE47 326 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ogg1O08760 345 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Rps16P14131 146 aaKnown RBP10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1396Q7TQS8 315 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 TMEM229BQ8BFQ2 167 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Dcaf12l1Q8CBW4 501 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ly6g6eQ8K1T6 166 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1260Q8VGN9 310 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 AldobQ91Y97 364 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Cryba2Q9JJV1 197 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Lrrc3cA0A1B0GRI5 255 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 4930435E12RikA6X8Z9 381 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Slc18b1D3Z5L6 459 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 CideaO70302 217 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 KrasP32883 189 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Slc38a11Q3USY0 453 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Wfdc8Q4KUS1 273 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Fbxw19Q8C2W8 466 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Dtx2Q8R3P2 619 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ccdc71lE9Q4T4 218 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Bmp8bP55105 399 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Col9a1Q05722 921 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 GcsamQ6RFH4 181 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr410Q8VFX7 315 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr402Q8VFX8 315 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Defb6Q91VD6 63 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm4787B2RUD9 748 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Vmn2r108E9PYS0 855 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm17669F6QL70 154 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm20939L7N243 523 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 St8sia2O35696 375 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Lsm2O35900 95 aaKnown RBP10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Pdcd6P12815 191 aaKnown RBP10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Scd2P13011 358 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1394Q8VET2 312 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Clec2dQ91V08 207 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Rnf141Q99MB7 230 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Prdm13E9PZZ1 754 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr178E9Q9T3 319 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 3110082J24RikF6Z6Z2 108 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Tmem178bM0QWJ9 172 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Chek1O35280 476 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 CryzP47199 331 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 TrmoQ562D6 431 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Taar3Q5QD16 343 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ptpmt1Q66GT5 193 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 TsfmQ9CZR8 324 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Plekhb1Q9QYE9 243 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Bcl3Q9Z2F6 448 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 OtofQ9ESF1 1997 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1274-psA0A1L1SQ02 309 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Obp2bA2BHR0 176 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm1330D3Z460 184 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm20815J3KMI0 227 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm20914J3QME2 227 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Nme1P15532 152 aaKnown RBP10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Fam173aQ501J2 229 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm21292Q78EE2 227 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1058Q7TR74 316 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 GmdsQ8K0C9 372 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr639Q8VGY8 316 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Defb7Q91V70 71 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 HaghQ99KB8 309 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Znf281Q99LI5 893 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Fbxo15Q9QZN0 433 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 FaimQ9WUD8 179 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Scml2B1AVB3 969 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 8030474K03RikE9Q4Y8 554 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Wsb1O54927 421 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 StomP54116 284 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Dlx4P70436 240 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 4933415F23RikQ14BX6 153 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Mob1bQ8BPB0 216 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Nrn1lQ8C4W3 162 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1079Q8VF52 315 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr57Q8VGU7 319 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Kcnip3Q9QXT8 256 aa10.42□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ighv5-15A0A0A6YWC7 117 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Alox12bO70582 701 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Spi1P17433 272 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Sox7P40646 380 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gpr137Q80ZU9 396 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Mansc1Q9CR33 414 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gpx8Q9D7B7 209 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ndrg3Q9QYF9 375 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm14403A2BFU4 402 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm19345G3UYD9 124 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Rdh16O54909 317 aa10.41□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Snai2P97469 269 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms