RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Fgf4P11403 202 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Ca3P16015 260 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr506Q7TRU6 314 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Ssxb2Q8C5Z3 165 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Nt5mQ8VCE6 220 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr340Q8VGL0 312 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Csnk1eQ9JMK2 416 aaKnown RBP9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Bex2Q9WTZ8 129 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr1289A0A288CFY5 326 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gm16519F8VQK7 162 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Kcns2O35174 477 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 P01881 257 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Cln6Q3U466 308 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Zfp30Q60585 533 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Npy4rQ61041 375 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Sp110Q8BVK9 445 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Parp11Q8CFF0 331 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Znf768Q8R0T2 568 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr1451Q8VFX5 310 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr802Q8VGJ2 312 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Tmprss11dQ8VHK8 417 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Rbfox1Q9JJ43 396 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr122W4VSP0 330 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Rps16P14131 146 aaKnown RBP9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr13P34984 310 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Fgf8P37237 268 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Slc5a12Q49B93 619 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Clec4a1Q80UI7 245 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Sdhaf4Q8BTE0 104 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Pla2g16Q8R3U1 162 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Rwdd3Q8VIL2 267 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Lysmd2Q9D7V2 215 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gm21783J3QM57 227 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Hbb-yP02104 147 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Pax4P32115 349 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Clec12bQ149M0 275 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Fbxo27Q6DIA9 280 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Vmn1r193Q8R258 319 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr279Q8VFD8 310 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr642Q924X8 314 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Cdc42ep3Q9CQC5 254 aa9.98□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Tmem240B2RWJ3 173 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gm17657E9PWY5 170 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gpm6aP35802 278 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gstp2P46425 210 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Dcaf7P61963 342 aaKnown RBP9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 C030005K15RikQ8BQN9 115 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Tmem230Q8CIB6 120 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Ddah2Q99LD8 285 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Fdx2Q9CPW2 174 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Spaca7Q9D2S4 182 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Borcs8Q9D6Y4 120 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Q9DAF8 208 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Cep250Q60952 2414 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gm20834J3QM72 227 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Cxcl12P40224 93 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Tmem217Q14AF1 189 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Prrc1Q3UPH1 443 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Tnfrsf8Q60846 498 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr193Q7TS43 309 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Map6Q7TSJ2 906 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Rab39bQ8BHC1 213 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 MpiQ924M7 423 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Ddb2Q99J79 432 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Prl3c1Q9QUN5 212 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gpr34Q9R1K6 375 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Angpt4Q9WVH6 509 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Vps13aQ5H8C4 3166 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 4930444P10RikD3YUR1 185 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gm42791D3YYB5 209 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gm4744D3Z3S5 154 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Hprt1P00493 218 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Zfp729aQ4QQP3 973 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Vmn1r217Q8R270 298 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Neu3Q9JMH7 418 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Samt1A2BED8 237 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gm15140A2BEE3 237 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Tcn2O88968 430 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 LepP41160 167 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr452Q7TRV8 317 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gpr61Q8C010 449 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr38Q8VGP4 317 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Rfpl4aQ8VH31 287 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Fxyd6Q9D164 94 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Golt1aQ9DCQ3 133 aa9.97□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Piezo2Q8CD54 2822 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Dock10Q8BZN6 2150 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Gm15821A6X8J8 139 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Adamtsl5D3Z689 485 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Ceacam16E9QA28 426 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Vmn1r204I7HIK1 302 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Ifna2P01573 190 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Itgb2P11835 771 aaKnown RBP9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Dok1P97465 482 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Fbxo7Q3U7U3 523 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Rnf180Q3U827 592 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 PhyhiplQ8BGT8 375 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Vrk3Q8K3G5 453 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Lrrc10Q8K3W2 274 aa9.96□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Olfr536Q8VFE9 307 aa9.96□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms