RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tstd3Q9D0B5 157 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Hoxd8P23463 289 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr141Q60880 325 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Mogat2Q80W94 334 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Wdyhv1Q80WB5 209 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Lrrc3bQ8VCH9 259 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1295Q8VF48 312 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr351Q8VGK1 310 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 GgactQ923B0 149 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rab27bQ99P58 218 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Chac2Q9CQG1 178 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm14412A2ARR7 526 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm15140A2BEE3 237 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr739E9Q1P0 309 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Crisp3Q03402 241 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Tmem56Q8CGF5 276 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 TifabQ8JZM6 147 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr654Q8VF27 341 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Lims1Q99JW4 325 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 MiipA2A7Y5 387 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Pafah1b2Q61206 229 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Npepl1Q6NSR8 524 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rcc1Q8VE37 421 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr344Q8VFP9 309 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Tmem123Q91Z22 195 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 NubplQ9CWD8 319 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Xcr1Q9R0M1 322 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm14444A2ARW3 426 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Lgals3P16110 264 aaKnown RBP9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rom1P32958 351 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ccr2P51683 373 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 S1pr2P52592 352 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr504Q7TRU7 318 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr180Q7TS48 317 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Zc3h12dQ8BIY3 533 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm9837Q8C607 126 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Fam103a1Q9CQY2 119 aaKnown RBP9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ttc9bQ9D6E4 239 aa9.06□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm44596A0A0N4SVA0 210 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Vmn1r127K7N6J5 305 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1053L7MU59 313 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 CebpbP28033 296 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Q3U595 105 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Arrdc5Q497K5 325 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Sap30lQ5SQF8 182 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Fbxw20Q5U467 468 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Nhlh2Q64221 135 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Lin28aQ8K3Y3 209 aaKnown RBP9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr763Q8VGC1 309 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1054Q8VGS7 312 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Osr2Q91ZD1 312 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rab32Q9CZE3 223 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Stard10Q9JMD3 291 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr196E9PYP4 309 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Pdcd6P12815 191 aaKnown RBP9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gpr12P35412 334 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Atf1P81269 269 aaKnown RBP9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rnf223Q3UV31 285 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Obox7Q4KL20 218 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Znf488Q5HZG9 337 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Plk3Q60806 631 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 F12Q80YC5 597 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Adipor1Q91VH1 375 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Tbx19Q99ME7 446 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Dppa2Q9CWH0 301 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Sdf2Q9DCT5 211 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 PrknQ9WVS6 464 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Pom121l12A0A1B0GSJ4 278 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 P01679 107 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Sf3b6P59708 125 aaKnown RBP9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Utf1Q6J1H4 339 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1342Q8VFY3 315 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Xrcc3Q9CXE6 349 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rcc1lQ9CYF5 461 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Timm8a1Q9WVA2 97 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm21783J3QM57 227 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Pcp2P12660 120 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Cox5bP19536 128 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 SspnQ62147 216 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Fam78bQ8BQN5 261 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr266Q8VFC3 316 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Tmem147Q9CQG6 224 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Mrps30Q9D0G0 442 aaKnown RBP9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ttc32Q9DAC7 148 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Mettl9Q9EPL4 318 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr959Q9EQ86 311 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Clec1bQ9JL99 229 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ltbp2O08999 1813 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Dvl1P51141 695 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Tas2r41P59532 308 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ybx1P62960 322 aaKnown RBP9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ctf2P83714 204 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Sf3a2Q62203 475 aaKnown RBP9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Defb22Q8BVC1 179 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1324Q8VEU7 332 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1446Q8VFX4 308 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr51Q8VGG9 307 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Klrc3Q9QXN7 221 aa9.05□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rhox7aA2A4F1 281 aa9.05□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms