RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 LRRC10Q5BKY1 277 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 TRIQKQ629K1 86 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 Q6P435 159 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 CD177Q8N6Q3 437 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 TMEM185AQ8NFB2 350 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 ANGPTL6Q8NI99 470 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 SETD6Q8TBK2 473 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 NUDCD2Q8WVJ2 157 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 FCAMRQ8WWV6 532 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 R3HDM4Q96D70 268 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 ABHD1Q96SE0 405 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 SULT4A1Q9BR01 284 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 SRRQ9GZT4 340 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 CHST6Q9GZX3 395 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF702PQ9H963 129 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 IFT46Q9NQC8 304 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 ETAA1Q9NY74 926 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 RCC2Q9P258 522 aaKnown RBP8.1□□□□□ -1.11
PHGDH-222ENST00000641587 SLC25A10Q9UBX3 287 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-222ENST00000641587 AK3Q9UIJ7 227 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 ELF5Q9UKW6 265 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-222ENST00000641587 HSF4Q9ULV5 492 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 TRAV24A0A0B4J272 114 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 FOXI3A8MTJ6 420 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-222ENST00000641587 SERPINE3A8MV23 424 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 M0R1W7 72 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 FBXO24O75426 580 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 TPPPO94811 219 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 HLA-DQB1P01920 261 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 FCER2P06734 321 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 NDUFB7P17568 137 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 CD40LGP29965 261 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 PPP5CP53041 499 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 EDDM3AQ14507 147 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 GRK1Q15835 563 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 PNLIPRP3Q17RR3 467 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 PLA1AQ53H76 456 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 VAX1Q5SQQ9 334 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 HACD4Q5VWC8 232 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 NCR3LG1Q68D85 454 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF788Q6ZQV5 615 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 TRAPPC6BQ86SZ2 158 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 Q8N402 240 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF561Q8N587 486 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 GDPD1Q8N9F7 314 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 OR52I2Q8NH67 350 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 CYYR1Q96J86 154 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-222ENST00000641587 CMSS1Q9BQ75 279 aaKnown RBP8.09□□□□□ -1.11
PHGDH-222ENST00000641587 SOSTQ9BQB4 213 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 HDHD3Q9BSH5 251 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-222ENST00000641587 IFT22Q9H7X7 185 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 METTL8Q9H825 291 aaKnown RBP8.09□□□□□ -1.11
PHGDH-222ENST00000641587 ABCB10Q9NRK6 738 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 SERTAD4Q9NUC0 356 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF222Q9UK12 451 aa8.09□□□□□ -1.11
PHGDH-222ENST00000641587 TMEM82A0PJX8 343 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 GABARAPH6UMI1 98 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 K7EIL1 84 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 CTDSPLO15194 276 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 SIGLEC5O15389 551 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 GLAP06280 429 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 LPLP06858 475 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 IGLL1P15814 213 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 OR3A1P47881 315 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 ERVFRD-1P60508 538 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 ATPAF1Q5TC12 328 aaPredicted RBP8.08□□□□□ -1.12
PHGDH-222ENST00000641587 ZNF57Q68EA5 555 aaPredicted RBP8.08□□□□□ -1.12
PHGDH-222ENST00000641587 CCBE1Q6UXH8 406 aaPredicted RBP8.08□□□□□ -1.12
PHGDH-222ENST00000641587 GDPD3Q7L5L3 318 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 FAM185AQ8N0U4 392 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 ZNRF1Q8ND25 227 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 OR4S1Q8NGB4 309 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 PIFOQ8TCI5 191 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 SMIM4Q8WVI0 70 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 BORCS5Q969J3 196 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 SDSLQ96GA7 329 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 MED30Q96HR3 178 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 SNX22Q96L94 193 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 DMRTB1Q96MA1 342 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 CCDC32Q9BV29 185 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 DNTTIP1Q9H147 329 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 MEGF9Q9H1U4 602 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 RANBP3Q9H6Z4 567 aaPredicted RBP8.08□□□□□ -1.12
PHGDH-222ENST00000641587 SCPEP1Q9HB40 452 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 C12orf4Q9NQ89 552 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.08□□□□□ -1.12
PHGDH-222ENST00000641587 KCNK7Q9Y2U2 307 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 KIAA2026Q5HYC2 2103 aa8.08□□□□□ -1.12
PHGDH-222ENST00000641587 LINC00854A0A1B0GVQ3 168 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 A0A1W2PRX2 142 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 TMEM30CPA0ZSE6 113 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 SULT1C2O00338 296 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 GSTZ1O43708 216 aaPredicted RBP8.07□□□□□ -1.12
PHGDH-222ENST00000641587 SSX5O60225 188 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 PSPNO60542 156 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 CA11O75493 328 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 RBBP9O75884 186 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 TK1P04183 234 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 COX7A1P24310 79 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms