RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
SCARB2-216ENST00000639300 TGOLN2O43493 480 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 HLA-GP17693 338 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 FAM214BQ7L5A3 538 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 SLC35D1Q9NTN3 355 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 AURKAIP1Q9NWT8 199 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-216ENST00000639300 CELA3AP09093 270 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 RAB7AP51149 207 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 SCGB2A2Q13296 93 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 VMA21Q3ZAQ7 101 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 OR5D13Q8NGL4 314 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 ADAMTS17Q8TE56 1095 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 ABHD14BQ96IU4 210 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 CA11O75493 328 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 CEBPDP49716 269 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-216ENST00000639300 UCP2P55851 309 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 BPIFB3P59826 476 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 BSXQ3C1V8 233 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 RSG1Q9BU20 258 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 CACFD1Q9UGQ2 172 aa12.45□□□□□ -0.42
SCARB2-216ENST00000639300 A0A1W2PRD5 423 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 A0A1W2PRF3 423 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 A0A1W2PRM7 423 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 CT45A10P0DMU9 189 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 OR4S2Q8NH73 311 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 TMEM230Q96A57 120 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 PIPOXQ9P0Z9 390 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 A0A1B0GTI1 187 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 A0A1B0GU03 582 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 ZIC3O60481 467 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 GALR1P47211 349 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 ZNF880Q6PDB4 577 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 NFAM1Q8NET5 270 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-216ENST00000639300 OR52L2PQ8NGH6 319 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 NEIL1Q96FI4 390 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-216ENST00000639300 TMEM56Q96MV1 263 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 MYOZ1Q9NP98 299 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-216ENST00000639300 H3BQ15 152 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 DEDDO75618 318 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 FABP1P07148 127 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 SULT1A2P50226 295 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 ERVS71-1P61550 626 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 DLK1P80370 383 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 TRAT1Q6PIZ9 186 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 MISP3Q96FF7 219 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 LURAP1Q96LR2 239 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 TMEM222Q9H0R3 208 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 CLCF1Q9UBD9 225 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 TRPM7Q96QT4 1865 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 NPIPB7O75200 414 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 CLEC3BP05452 202 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 CCL8P80075 99 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 SLC23A3Q6PIS1 610 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 TIPARPQ7Z3E1 657 aaKnown RBP12.44□□□□□ -0.42
SCARB2-216ENST00000639300 OR52M1Q8NGK5 317 aa12.44□□□□□ -0.42
SCARB2-216ENST00000639300 C20orf202A1L168 122 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 SPP1P10451 314 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 SUCLG1P53597 346 aaKnown RBP12.43□□□□□ -0.42
SCARB2-216ENST00000639300 ZNF273Q14593 569 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 ATP6V1FQ16864 119 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 HSD17B10Q99714 261 aaKnown RBP12.43□□□□□ -0.42
SCARB2-216ENST00000639300 GINS3Q9BRX5 216 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 HEATR5AQ86XA9 2040 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 HEATR1Q9H583 2144 aaKnown RBP12.43□□□□□ -0.42
SCARB2-216ENST00000639300 A0A0G2JMM0 328 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 A0A1W2PPB8 328 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 A0A1W2PRS3 328 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 MSGN1A6NI15 193 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 CRYM-AS1A6NIL9 109 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 KIR3DP1A8MWS1 328 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 OR2H2O95918 312 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 FNDC7Q5VTL7 733 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 MOB3AQ96BX8 217 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 DLL3Q9NYJ7 618 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 NOTCH4Q99466 2003 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 HFEQ30201 348 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 C10orf128Q5T292 105 aa12.43□□□□□ -0.42
SCARB2-216ENST00000639300 MFSD2BA6NFX1 497 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 FGF2P09038 288 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 HKR1P10072 659 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 FHITP49789 147 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 CNN1P51911 297 aaKnown RBP12.42□□□□□ -0.42
SCARB2-216ENST00000639300 GNB2P62879 340 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 RPEQ96AT9 228 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 SIGLEC12Q96PQ1 595 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 HSF4Q9ULV5 492 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 TRAPPC1Q9Y5R8 145 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 CHEK1O14757 476 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 PAGE4O60829 102 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 RHOBP62745 196 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 SMUG1Q53HV7 270 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 SLC2A8Q9NY64 477 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 LNP1A1A4G5 178 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 MPTX1A8MV57 137 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 PRDX2P32119 198 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 CSN1S1P47710 185 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 FAM78BQ5VT40 261 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 SIGLECL1Q8N7X8 197 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 GFI1Q99684 422 aa12.42□□□□□ -0.42
SCARB2-216ENST00000639300 GAPDHP04406 335 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms