RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 RAG2P55895 527 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 FNDC7Q5VTL7 733 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 LYZL2Q7Z4W2 148 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 ZNF485Q8NCK3 441 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 NQO2P16083 231 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 ORM2P19652 201 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 CD40P25942 277 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 IL13RA2Q14627 380 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 OR4D10Q8NGI6 311 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 FAM131CQ96AQ9 280 aa11.71□□□□□ -0.53
SCARB2-215ENST00000639145 SF3B6Q9Y3B4 125 aaKnown RBP11.71□□□□□ -0.53
SCARB2-215ENST00000639145 TXNL1O43396 289 aa11.71□□□□□ -0.54
SCARB2-215ENST00000639145 CHST1O43916 411 aa11.71□□□□□ -0.54
SCARB2-215ENST00000639145 KIR2DS2P43631 304 aa11.71□□□□□ -0.54
SCARB2-215ENST00000639145 SURF2Q15527 256 aaPredicted RBP11.71□□□□□ -0.54
SCARB2-215ENST00000639145 HOGA1Q86XE5 327 aa11.71□□□□□ -0.54
SCARB2-215ENST00000639145 VOPP1Q96AW1 172 aa11.71□□□□□ -0.54
SCARB2-215ENST00000639145 ZNF426Q9BUY5 554 aa11.71□□□□□ -0.54
SCARB2-215ENST00000639145 DLL3Q9NYJ7 618 aa11.71□□□□□ -0.54
SCARB2-215ENST00000639145 CTDSPLO15194 276 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 BCL2L11O43521 198 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 IGHV1-2P23083 117 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 ECSCRQ19T08 205 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 FAM201AQ5SY85 155 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 FANCMQ8IYD8 2048 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 ODAMA1E959 279 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 H7BYZ3 331 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 GSTZ1O43708 216 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-215ENST00000639145 SNRNP40Q96DI7 357 aaKnown RBP11.7□□□□□ -0.54
SCARB2-215ENST00000639145 NEIL1Q96FI4 390 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-215ENST00000639145 PFDN5Q99471 154 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 NKX2-6A6NCS4 301 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 ZNF705FA8MVS1 300 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-215ENST00000639145 K7N7A8 449 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 HLA-DQB1P01920 261 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 CELA3BP08861 270 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-215ENST00000639145 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-215ENST00000639145 BSPH1Q075Z2 132 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 FFAR4Q5NUL3 377 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 ADAD2Q8NCV1 583 aaKnown RBP11.7□□□□□ -0.54
SCARB2-215ENST00000639145 OR1L1Q8NH94 360 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 LEAP2Q969E1 77 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 Q9N2K0 584 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 IGHV1-69-2A0A0G2JMI3 117 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 WNT9BO14905 357 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 PSG2P11465 335 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 SMIM7Q9BQ49 75 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 NDFIP1Q9BT67 221 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 TMEM147Q9BVK8 224 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 TUBG2Q9NRH3 451 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 ELOVL5Q9NYP7 299 aa11.7□□□□□ -0.54
SCARB2-215ENST00000639145 IGHV3-21A0A0B4J1V1 117 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 LRRC3CA6NJW4 275 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 ERVFRD-1P60508 538 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 BMPERQ8N8U9 685 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 ZNRF1Q8ND25 227 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 PATZ1Q9HBE1 687 aaKnown RBP11.69□□□□□ -0.54
SCARB2-215ENST00000639145 SCN8AQ9UQD0 1980 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 UMAD1C9J7I0 102 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 RAB4AP20338 218 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 ZNF596Q8TC21 504 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 ABHD14AQ9BUJ0 271 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 FBXL17Q9UF56 701 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 FOXD3Q9UJU5 478 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-215ENST00000639145 GAB2Q9UQC2 676 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 IGHMP01871 453 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 CD1AP06126 327 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 CXCL3P19876 107 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 DOLPP1Q86YN1 238 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 OR10A7Q8NGE5 316 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 MARS2Q96GW9 593 aaKnown RBP11.69□□□□□ -0.54
SCARB2-215ENST00000639145 SNX22Q96L94 193 aa11.69□□□□□ -0.54
SCARB2-215ENST00000639145 ELF5Q9UKW6 265 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-215ENST00000639145 ARG1P05089 322 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 LYZP61626 148 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 HMGN3Q15651 99 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 PHYHD1Q5SRE7 291 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 DBX2Q6ZNG2 339 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 ZCCHC24Q8N2G6 241 aaKnown RBP11.68□□□□□ -0.54
SCARB2-215ENST00000639145 DUSP18Q8NEJ0 188 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 DTD1Q8TEA8 209 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 IGHV3OR16-10A0A075B7F0 116 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 B9A039 149 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 RAB29O14966 203 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 GNG7O60262 68 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 ZG16O60844 167 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 GLIPR1P48060 266 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 TMEM41BQ5BJD5 291 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 C1orf100Q5SVJ3 147 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 LINC00596Q86U02 117 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 PTX4Q96A99 478 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 MYLKQ15746 1914 aa11.68□□□□□ -0.54
SCARB2-215ENST00000639145 APOBEC3AP31941 199 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-215ENST00000639145 KLF9Q13886 244 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-215ENST00000639145 TBR1Q16650 682 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms