RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 GLRX2Q9NS18 164 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 PCOLCE2Q9UKZ9 415 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 J3KRW8 73 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 LIFP15018 202 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 BRS3P32247 399 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 HARBI1Q96MB7 349 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 HSPB9Q9BQS6 159 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 TLNRD1Q9H1K6 362 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 DNASE2O00115 360 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-213ENST00000638680 SOSTQ9BQB4 213 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 IGKV1-8A0A0C4DH67 115 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 HIST1H1BP16401 226 aaKnown RBP16.09■□□□□ 0.17
SCARB2-213ENST00000638680 H2BFSP57053 126 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 SLC35B1P78383 322 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 ZNF343Q6P1L6 599 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 ATG101Q9BSB4 218 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 DXOO77932 396 aaKnown RBP16.09■□□□□ 0.17
SCARB2-213ENST00000638680 P2RY4P51582 365 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 ZP4Q12836 540 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 LILRB1Q8NHL6 650 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-213ENST00000638680 OR51B2Q9Y5P1 312 aa16.09■□□□□ 0.17
SCARB2-213ENST00000638680 PAPPA2Q9BXP8 1791 aa16.08■□□□□ 0.17
SCARB2-213ENST00000638680 LMX1BO60663 402 aa16.08■□□□□ 0.17
SCARB2-213ENST00000638680 PCGF1Q9BSM1 259 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 WNT16Q9UBV4 365 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 A0A1W2PPE3 182 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 HERVK_113P61574 105 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 SSX8Q7RTT4 187 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 RNF7Q9UBF6 113 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 CA11O75493 328 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 NDUFB4O95168 129 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 HSPB1P04792 205 aaKnown RBP16.08■□□□□ 0.16
SCARB2-213ENST00000638680 CCL4P13236 92 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 Q5BKY6 102 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 OR4C12Q96R67 309 aa16.08■□□□□ 0.16
SCARB2-213ENST00000638680 TMSB15BA0A087X1C1 80 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 ASCC3Q8N3C0 2202 aaKnown RBP16.07■□□□□ 0.16
SCARB2-213ENST00000638680 RARRES2Q99969 163 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 NHLRC3Q5JS37 347 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 LAIR2Q6ISS4 152 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 H3BVH4 76 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 J3QR06 171 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 SRSF9Q13242 221 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCARB2-213ENST00000638680 AQP3Q92482 292 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 SMOC1Q9H4F8 434 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 SF3B6Q9Y3B4 125 aaKnown RBP16.07■□□□□ 0.16
SCARB2-213ENST00000638680 TMEM210A6NLX4 147 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 LINC00518Q8N0U6 118 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 WDR31Q8NA23 367 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 OR1P1Q8NH06 330 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 ZNF665Q9H7R5 613 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 IL19Q9UHD0 177 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 IGHV3-21A0A0B4J1V1 117 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 OR4C46A6NHA9 309 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 TMEM222Q9H0R3 208 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 PIPOXQ9P0Z9 390 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 TUBD1Q9UJT1 453 aa16.07■□□□□ 0.16
SCARB2-213ENST00000638680 EIF3GO75821 320 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCARB2-213ENST00000638680 COL10A1Q03692 680 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 PLPPR5Q32ZL2 321 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 H0Y980 276 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 H0YL77 283 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 UPK3AO75631 287 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 ID4P47928 161 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 LGALS7P47929 136 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 SPATA45Q537H7 98 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 FAM222BQ8WU58 562 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 A0A0U1RQV5 110 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 LOC389332A0A1B0GUA5 103 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 GABRA6Q16445 453 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 SFTPA2Q8IWL1 248 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 PXMP4Q9Y6I8 212 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 NHSL1Q5SYE7 1610 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 MFAP2P55001 183 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 FOXL2P58012 376 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 PAXXQ9BUH6 204 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 IL36RNQ9UBH0 155 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 PRNTQ86SH4 94 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 MDP1Q86V88 176 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 GBGT1Q8N5D6 347 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 STXBP6Q8NFX7 210 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 FAM216AQ8WUB2 273 aa16.06■□□□□ 0.16
SCARB2-213ENST00000638680 LAMB2P55268 1798 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 GCGP01275 180 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 OR4A47Q6IF82 309 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 OR51M1Q9H341 326 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 PCM1Q15154 2024 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 MGPP08493 103 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 FCARP24071 287 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 KIR2DL1P43626 348 aaPredicted RBP16.05■□□□□ 0.16
SCARB2-213ENST00000638680 MYOZ3Q8TDC0 251 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 AQP10Q96PS8 301 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 PIN1P1O15428 100 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 SCTP09683 121 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 CLDN18P56856 261 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 OR1L8Q8NGR8 309 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 Q8WTZ3 238 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 SNRNP40Q96DI7 357 aaKnown RBP16.05■□□□□ 0.16
SCARB2-213ENST00000638680 ADAMTSL1Q8N6G6 1762 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 IGHV5-10-1A0A0J9YXX1 117 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms