RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	GPX8	Q8TED1	209 aa		18.22	■□□□□ 0.51
CHRNA7-231	ENST00000637786	ABHD1	Q96SE0	405 aa		18.22	■□□□□ 0.51
CHRNA7-231	ENST00000637786	SOST	Q9BQB4	213 aa		18.22	■□□□□ 0.51
CHRNA7-231	ENST00000637786	CABLES2	Q9BTV7	478 aa		18.22	■□□□□ 0.51
CHRNA7-231	ENST00000637786	ZNF69	Q9UC07	566 aa		18.22	■□□□□ 0.51
CHRNA7-231	ENST00000637786	ANAPC10	Q9UM13	185 aa		18.22	■□□□□ 0.51
CHRNA7-231	ENST00000637786	MEIOC	A2RUB1	952 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	YPEL1	O60688	119 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	RGS11	O94810	467 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	IGLV1-47	P01700	117 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	ARG1	P05089	322 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	PRRX1	P54821	245 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	MRPS10	P82664	201 aa	Known RBP	18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	TUSC1	Q2TAM9	212 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	RUSC1-AS1	Q66K80	236 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	BRD3OS	Q6XYD6	125 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	C5orf24	Q7Z6I8	188 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	OR6Q1	Q8NGQ2	317 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	IL1F10	Q8WWZ1	152 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	MAFIP	Q8WZ33	124 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	GCDH	Q92947	438 aa	Predicted RBP	18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	YPEL2	Q96QA6	119 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	PSG11	Q9UQ72	335 aa		18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	TBL2	Q9Y4P3	447 aa	Known RBP	18.21	■□□□□ 0.51
CHRNA7-231	ENST00000637786	IGKV1D-8	A0A087WSZ0	117 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	IGHV3-43	A0A0B4J1X8	118 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	FAM172BP	A6NC97	362 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786		J3QR06	171 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	TOR1A	O14656	332 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	CTXN2	P0C2S0	81 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	GSTT2	P0CG29	244 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	GSTT2B	P0CG30	244 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	IGHV3-43D	P0DP04	118 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	ZBTB25	P24278	435 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	SAA4	P35542	130 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	LGALS4	P56470	323 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	MORN2	Q502X0	79 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	MINOS1	Q5TGZ0	78 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	CCDC190	Q86UF4	302 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	LINC00311	Q8N616	119 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	BEST4	Q8NFU0	473 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	OR52L2P	Q8NGH6	319 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	CREB3L1	Q96BA8	519 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	TOLLIP	Q9H0E2	274 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	IFT46	Q9NQC8	304 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	ANXA10	Q9UJ72	324 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	MINOS1-NBL1	R4GNA1	71 aa		18.2	■□□□□ 0.5
CHRNA7-231	ENST00000637786	NIPBL	Q6KC79	2804 aa	eCLIP	18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	IGKV1-6	A0A0C4DH72	117 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	FABP12	A6NFH5	140 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	CTDSPL	O15194	276 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	NAT1	P18440	290 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	PTBP1	P26599	531 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	IL18	Q14116	193 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	HERPUD1	Q15011	391 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	HLA-DRB5	Q30154	266 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	UTF1	Q5T230	341 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	LINC00299	Q6ZSB3	139 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	LURAP1L	Q8IV03	231 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	GVQW1	Q8N7I0	195 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	ZNF439	Q8NDP4	499 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	OR4P4	Q8NGL7	312 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	MMP28	Q9H239	520 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	PTTG2	Q9NZH5	202 aa		18.19	■□□□□ 0.5
CHRNA7-231	ENST00000637786	TRBV6-7	A0A0A0MS04	114 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786		A0A1W2PRD5	423 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786		A0A1W2PRF3	423 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786		A0A1W2PRM7	423 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	GABARAP	H6UMI1	98 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	ITGB1BP1	O14713	200 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	ETV6	P41212	452 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	MADCAM1	Q13477	382 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	GNMT	Q14749	295 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	OR10V1	Q8NGI7	309 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	LEAP2	Q969E1	77 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	SLC23A1	Q9UHI7	598 aa		18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	18.18	■□□□□ 0.5
CHRNA7-231	ENST00000637786	MEIS3P1	A6NDR6	274 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	HSPA12A	O43301	675 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	HTR1D	P28221	377 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	PPP1CC	P36873	323 aa	Known RBP	18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	GNG10	P50151	68 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	SSBP1	Q04837	148 aa	Known RBP	18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	IGSF11	Q5DX21	431 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	SPANXN2	Q5MJ10	180 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	FAM131A	Q6UXB0	335 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	SLC25A48	Q6ZT89	311 aa	Known RBP	18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	OR10J5	Q8NHC4	309 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	SMIM4	Q8WVI0	70 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	FCAMR	Q8WWV6	532 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	SNAPC3	Q92966	411 aa		18.17	■□□□□ 0.5
CHRNA7-231	ENST00000637786	BUB1B-PAK6	H3BSN5	160 aa		18.16	■□□□□ 0.5
CHRNA7-231	ENST00000637786	IGHV3-7	P01780	117 aa		18.16	■□□□□ 0.5
CHRNA7-231	ENST00000637786	RCVRN	P35243	200 aa		18.16	■□□□□ 0.5
CHRNA7-231	ENST00000637786	ACTB	P60709	375 aa		18.16	■□□□□ 0.5
CHRNA7-231	ENST00000637786	ACTG1	P63261	375 aa		18.16	■□□□□ 0.5
CHRNA7-231	ENST00000637786	FAM53A	Q6NSI3	398 aa	Predicted RBP	18.16	■□□□□ 0.5
CHRNA7-231	ENST00000637786	BCL6B	Q8N143	479 aa	Predicted RBP	18.16	■□□□□ 0.5
CHRNA7-231	ENST00000637786	OR52I2	Q8NH67	350 aa		18.16	■□□□□ 0.5
CHRNA7-231	ENST00000637786	EDARADD	Q8WWZ3	215 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms