RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SC5DO75845 299 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 IGHG4P01861 327 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 GLAP06280 429 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 RCC1P18754 421 aaPredicted RBP14.46□□□□□ -0.09
CLN6-220ENST00000637450 SOX6P35712 828 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 RAB25P57735 213 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 DEFB136Q30KP8 78 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 TTC23Q5W5X9 447 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 LYPD6Q86Y78 171 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 PRR18Q8N4B5 295 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 TFAP2CQ92754 450 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 BANF2Q9H503 90 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 LANCL1O43813 399 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 RAMP3O60896 148 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 MAS1P04201 325 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 IGF1P05019 195 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 FUT3P21217 361 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 ST3GAL4Q11206 333 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 AWAT2Q6E213 333 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 TRAT1Q6PIZ9 186 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 CYGBQ8WWM9 190 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 SELENOIQ9C0D9 397 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 TAF9BQ9HBM6 251 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 ZNF580Q9UK33 172 aa14.45□□□□□ -0.1
CLN6-220ENST00000637450 MGMTP16455 207 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 VDAC1P21796 283 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 ADARB1P78563 741 aaKnown RBP14.44□□□□□ -0.1
CLN6-220ENST00000637450 DOC2BQ14184 412 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 MORN2Q502X0 79 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 SIGIRRQ6IA17 410 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 SETD9Q8NE22 299 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 OR5M8Q8NGP6 311 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 Q96M66 194 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 KCTD7Q96MP8 289 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 DERL3Q96Q80 235 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 OR2S2Q9NQN1 319 aa14.44□□□□□ -0.1
CLN6-220ENST00000637450 MBNL3Q9NUK0 354 aaKnown RBP14.44□□□□□ -0.1
CLN6-220ENST00000637450 UBE2QL1A1L167 161 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 CRTAPO75718 401 aaPredicted RBP14.43□□□□□ -0.1
CLN6-220ENST00000637450 CD1AP06126 327 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 PSMB8P28062 276 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 CAPGP40121 348 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 LUMP51884 338 aaPredicted RBP14.43□□□□□ -0.1
CLN6-220ENST00000637450 TAS2R43P59537 309 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 LSAMPQ13449 338 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 ZNF554Q86TJ5 538 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 C4orf3Q8WVX3 66 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 CYYR1Q96J86 154 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 WWC2-AS2Q96NR7 200 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 CHCHD6Q9BRQ6 235 aa14.43□□□□□ -0.1
CLN6-220ENST00000637450 LSM4Q9Y4Z0 139 aaKnown RBP14.43□□□□□ -0.1
CLN6-220ENST00000637450 PNMA8CA0A1B0GUJ8 204 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 EFCAB10A6NFE3 127 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 LRRC36Q1X8D7 754 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 C9orf66Q5T8R8 295 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 C5orf24Q7Z6I8 188 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 DHRSXQ8N5I4 330 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 OR52L2PQ8NGH6 319 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 UQCC2Q9BRT2 126 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 KCNIP1Q9NZI2 227 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 CNOT2Q9NZN8 540 aaKnown RBP14.42□□□□□ -0.1
CLN6-220ENST00000637450 ZNF107Q9UII5 783 aaPredicted RBP14.42□□□□□ -0.1
CLN6-220ENST00000637450 SCOCQ9UIL1 159 aa14.42□□□□□ -0.1
CLN6-220ENST00000637450 PDCD6O75340 191 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 NHLRC4P0CG21 123 aaPredicted RBP14.41□□□□□ -0.1
CLN6-220ENST00000637450 OR5H8P0DN80 308 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 VSIG8P0DPA2 414 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 SLC2A2P11168 524 aaPredicted RBP14.41□□□□□ -0.1
CLN6-220ENST00000637450 CELP19835 753 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 HTD2P86397 168 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 FHL3Q13643 280 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 GNMTQ14749 295 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 MMDQ15546 238 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 LAIR2Q6ISS4 152 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 ODF3L1Q8IXM7 274 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 PACRGLQ8N7B6 248 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 MRPL30Q8TCC3 161 aaKnown RBP14.41□□□□□ -0.1
CLN6-220ENST00000637450 MYOZ3Q8TDC0 251 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 RITA1Q96K30 269 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 ABHD14AQ9BUJ0 271 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 C8orf4Q9NR00 106 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 GHRLQ9UBU3 117 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 JPT1Q9UK76 154 aa14.41□□□□□ -0.1
CLN6-220ENST00000637450 EBAG9O00559 213 aa14.4□□□□□ -0.1
CLN6-220ENST00000637450 MYF6P23409 242 aa14.4□□□□□ -0.1
CLN6-220ENST00000637450 PPIFP30405 207 aaKnown RBP14.4□□□□□ -0.1
CLN6-220ENST00000637450 PPP1CCP36873 323 aaKnown RBP14.4□□□□□ -0.1
CLN6-220ENST00000637450 KIAA0141Q14154 515 aaPredicted RBP14.4□□□□□ -0.1
CLN6-220ENST00000637450 LY6G6FQ5SQ64 297 aa14.4□□□□□ -0.1
CLN6-220ENST00000637450 NKAIN3Q8N8D7 197 aa14.4□□□□□ -0.1
CLN6-220ENST00000637450 OR11H1Q8NG94 326 aa14.4□□□□□ -0.1
CLN6-220ENST00000637450 PSORS1C1Q9UIG5 152 aa14.4□□□□□ -0.1
CLN6-220ENST00000637450 SEC14L6B5MCN3 397 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 YPEL1O60688 119 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 WNT4P56705 351 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 ACTBP60709 375 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 C6orf141Q5SZD1 244 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 THRSPQ92748 146 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 FAM46BQ96A09 425 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 UBE2E2Q96LR5 201 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms