RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ZNF703Q9H7S9 590 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 OR2W1Q9Y3N9 320 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 RNF115Q9Y4L5 304 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 DNPH1O43598 174 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 LY86O95711 162 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 IFNA17P01571 189 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 TUBG1P23258 451 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 IDH3GP51553 393 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 ZNF816Q0VGE8 651 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 TESK1Q15569 626 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 RNF212Q495C1 297 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 HEPN1Q6WQI6 88 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 COLCA1Q6ZS62 124 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 TCTEX1D2Q8WW35 142 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 CDX2Q99626 313 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 PLSCR2Q9NRY7 297 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 DOK5Q9P104 306 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 ZNF391Q9UJN7 358 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 CEBPZOSA8MTT3 80 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 RBMXL2O75526 392 aaKnown RBP11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 APLNRP35414 380 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 CLN3Q13286 438 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 ZNF826PQ6ZT77 177 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 LFNGQ8NES3 379 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 SCGB1C1Q8TD33 95 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 POM121L2Q96KW2 1035 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 ATP5SQ99766 215 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 PSENENQ9NZ42 101 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 TECTAO75443 2155 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 IGHV2-5P01817 119 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 CEACAM6P40199 344 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 EIF2S3P41091 472 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 SSPNQ14714 243 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 ELOBQ15370 118 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 BTNL3Q6UXE8 466 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 MDP1Q86V88 176 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 CLDND2Q8NHS1 167 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 EDARADDQ8WWZ3 215 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 TAAR9Q96RI9 348 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 ZNF251Q9BRH9 671 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 OR2J1Q9GZK6 312 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 KIAA1456Q9P272 454 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 METTL1Q9UBP6 276 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 DMXL1Q9Y485 3027 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 UBE2L5PA0A1B0GUS4 154 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 DEFB108AA8MXU0 73 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 WISP2O76076 250 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 CER1O95813 267 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 PMP22Q01453 160 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 ZNF324BQ6AW86 544 aaPredicted RBP11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 FAM185AQ8N0U4 392 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 RFESDQ8TAC1 157 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 OR5P3Q8WZ94 311 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 GPR61Q9BZJ8 451 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 UFSP2Q9NUQ7 469 aa11.91□□□□□ -0.5
CACNA1A-228ENST00000636610 HEATR1Q9H583 2144 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 IFITM10A6NMD0 228 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 C9orf172C9J069 976 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 WNT9BO14905 357 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 WDR25Q64LD2 544 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 ZNF787Q6DD87 383 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 OR10V1Q8NGI7 309 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 ARRDC1-AS1Q9H2J1 176 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 TPRP12270 2363 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 IGHV3-43A0A0B4J1X8 118 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 A0A1W2PNU3 283 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 SOX15O60248 233 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 RAMP3O60896 148 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 LYZL6O75951 148 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 CLDN1O95832 211 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 IGKV1-5P01602 117 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 S100A8P05109 93 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 SMIM6P0DI80 62 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 IGHV3-43DP0DP04 118 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 LMO1P25800 156 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 CD200P41217 278 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 TAS2R30P59541 319 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 TLE4Q04727 773 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 OR10D4PQ8NGN7 298 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 GNPNAT1Q96EK6 184 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 GGACTQ9BVM4 153 aa11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 AURKAIP1Q9NWT8 199 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-228ENST00000636610 H0Y980 276 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 SYNGR2O43760 224 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 NXPH2O95156 264 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 RIF1Q5UIP0 2472 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 TVP23CQ96ET8 276 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM173AQ9BQD7 235 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 POLEQ07864 2286 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 OR2H2O95918 312 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 S100GP29377 79 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 GNG3P63215 75 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 TRA2AQ13595 282 aaKnown RBP eCLIP11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 WDR86Q86TI4 376 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 HAPLN4Q86UW8 402 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 OR5A2Q8NGI9 324 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 GATAD1Q8WUU5 269 aa11.89□□□□□ -0.51
CACNA1A-228ENST00000636610 TOLLIPQ9H0E2 274 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms