RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 SCO1O75880 301 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 SEMA4FO95754 770 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 EPPINO95925 133 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 NRASP01111 189 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 IGHMP01871 453 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 OPN1SWP03999 348 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ATP5G1P05496 136 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 CSN2P05814 226 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 CD48P09326 243 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 LGALS1P09382 135 aaKnown RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 PATE4P0C8F1 98 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 RAB3BP20337 219 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 FGF7P21781 194 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 PRTN3P24158 256 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 RND2P52198 227 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 POLR2HP52434 150 aaKnown RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 EMP1P54849 157 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 H2BFSP57053 126 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 MTPNP58546 118 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 NCS1P62166 190 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 LCN6P62502 163 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 HIST1H1AQ02539 215 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 MXD1Q05195 221 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 MEF2CQ06413 473 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 PAFAH1B3Q15102 231 aaKnown RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 EBPQ15125 230 aaKnown RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 SSX1Q16384 188 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TIMM50Q3ZCQ8 353 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 PAGE3Q5JUK9 113 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 FAM201AQ5SY85 155 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 NCMAPQ5T1S8 102 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 LINC00242Q5T6M2 205 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF57Q68EA5 555 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 GLYATQ6IB77 296 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 HSD17B13Q7Z5P4 300 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 CROCCP2Q86T23 111 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TGIF2LYQ8IUE0 185 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 C11orf53Q8IXP5 236 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 H1FOOQ8IZA3 346 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 DEFB125Q8N687 156 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF433Q8N7K0 673 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 KBTBD8Q8NFY9 601 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 OR4C3Q8NH37 302 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 OR1L1Q8NH94 360 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 JOSD2Q8TAC2 188 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 VN1R17PQ8TDU5 208 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF418Q8TF45 676 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM230Q96A57 120 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF501Q96CX3 271 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 STARD4Q96DR4 205 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM101Q96IK0 257 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 BTN2A3PQ96KV6 586 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TP53RKQ96S44 253 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM70Q9BUB7 260 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 PBDC1Q9BVG4 233 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 SNHG12Q9BXW3 62 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 PITPNM3Q9BZ71 974 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 CHST6Q9GZX3 395 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM222Q9H0R3 208 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 LPAR5Q9H1C0 372 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 OR52D1Q9H346 318 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 PLEKHA3Q9HB20 300 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 LHX9Q9NQ69 397 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 UQCC1Q9NVA1 299 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF230Q9UIE0 474 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 SCP2D1Q9UJQ7 156 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TBX21Q9UL17 535 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TNFSF18Q9UNG2 199 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ST3GAL6Q9Y274 331 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 LAMTOR2Q9Y2Q5 125 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 PPP2R2CQ9Y2T4 447 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 HSPE1-MOB4S4R3N1 261 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 NOTCH3Q9UM47 2321 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ADGRL2O95490 1459 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 DOCK6Q96HP0 2047 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 TRAV38-1A0A0B4J264 116 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 TRAV26-2A0A0B4J265 109 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 A0A1B0GXF2 115 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 GMNCA6NCL1 334 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 RBFOX3A6NFN3 312 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF850A8MQ14 1090 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 C8orf87E5RJ46 101 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 FAM72CH0Y354 149 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 H7C1H1 209 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 I3L4J1 428 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 K7ENP7 123 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 RBFOX2O43251 390 aaKnown RBP eCLIP2.3□□□□□ -2.04
PSPC1-208ENST00000635562 SNAP91O60641 907 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 TRMUO75648 421 aaKnown RBP2.3□□□□□ -2.04
PSPC1-208ENST00000635562 DHRS3O75911 302 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 OR2A4O95047 310 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF682O95780 498 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 LALBAP00709 142 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 PTHP01270 115 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 SERPINE1P05121 402 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 PRSS1P07477 247 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 CD55P08174 381 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 SCTP09683 121 aa2.3□□□□□ -2.04
PSPC1-208ENST00000635562 SLC2A2P11168 524 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms