RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 PCNPQ8WW12 178 aaKnown RBP4.66□□□□□ -1.66
NEK3-211ENST00000629912 RND1Q92730 232 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 SAT2Q96F10 170 aaPredicted RBP4.66□□□□□ -1.66
NEK3-211ENST00000629912 COQ2Q96H96 371 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 OR2V2Q96R30 315 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 MRPL37Q9BZE1 423 aaKnown RBP4.66□□□□□ -1.66
NEK3-211ENST00000629912 PLEKHF2Q9H8W4 249 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 BARX1Q9HBU1 254 aaPredicted RBP4.66□□□□□ -1.66
NEK3-211ENST00000629912 NGBQ9NPG2 151 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 SDHAF2Q9NX18 166 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 OR1A1Q9P1Q5 309 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 RNF7Q9UBF6 113 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 GAB2Q9UQC2 676 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 LSM5Q9Y4Y9 91 aaKnown RBP4.66□□□□□ -1.66
NEK3-211ENST00000629912 ANKRD11Q6UB99 2663 aaPredicted RBP4.66□□□□□ -1.66
NEK3-211ENST00000629912 PTPRQQ9UMZ3 2332 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 DSCAMO60469 2012 aa4.65□□□□□ -1.66
NEK3-211ENST00000629912 DYSFO75923 2080 aa4.65□□□□□ -1.66
NEK3-211ENST00000629912 IGHV3-64DA0A0J9YX35 117 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 RAB19A4D1S5 217 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 KIAA1324LA8MWY0 1029 aaPredicted RBP4.65□□□□□ -1.67
NEK3-211ENST00000629912 KRBOX1C9JBD0 128 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 ATP6V1G2-DDX39BF2Z307 99 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 K7N7A8 449 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 ITGB1BP1O14713 200 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 SPINT2O43291 252 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 IGHV1-46P01743 117 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 SERPINE2P07093 398 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 OR8U9P0C7N5 309 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 EGR1P18146 543 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 PVALBP20472 110 aaPredicted RBP4.65□□□□□ -1.67
NEK3-211ENST00000629912 IL2RGP31785 369 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 CCKARP32238 428 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 NKX2-1P43699 371 aaPredicted RBP4.65□□□□□ -1.67
NEK3-211ENST00000629912 GLIPR1P48060 266 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 CEBPDP49716 269 aaPredicted RBP4.65□□□□□ -1.67
NEK3-211ENST00000629912 KLRB1Q12918 225 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 GNMTQ14749 295 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 FBXL19-AS1Q494R0 122 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 ZNF585BQ52M93 769 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 MEX3BQ6ZN04 569 aaKnown RBP4.65□□□□□ -1.67
NEK3-211ENST00000629912 ZNF66Q6ZN08 573 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 MOGAT3Q86VF5 341 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 FOXRED2Q8IWF2 684 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 STPG2Q8N412 459 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 DRAM1Q8N682 238 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 ZNF645Q8N7E2 425 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 OR8U1Q8NH10 309 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 OR1L1Q8NH94 360 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 RNF141Q8WVD5 230 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 ITLN1Q8WWA0 313 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 IL1F10Q8WWZ1 152 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 MARC2Q969Z3 335 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 GPR146Q96CH1 333 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 SDSLQ96GA7 329 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 CXorf58Q96LI9 332 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 GCM1Q9NP62 436 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 RAB9BQ9NP90 201 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 ZC4H2Q9NQZ6 224 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 LIN7CQ9NUP9 197 aaKnown RBP4.65□□□□□ -1.67
NEK3-211ENST00000629912 MGAQ8IWI9 3026 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 DSPP15924 2871 aaKnown RBP4.65□□□□□ -1.67
NEK3-211ENST00000629912 ICE1Q9Y2F5 2266 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 DSCAML1Q8TD84 2053 aa4.65□□□□□ -1.67
NEK3-211ENST00000629912 ARID1AO14497 2285 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 BORCS7-ASMTA0A0B4J1R7 106 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 ODAMA1E959 279 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 FAM90A26D6RGX4 464 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 I3L521 148 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 F2RL2O00254 374 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 ADAM20O43506 726 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 SPRY3O43610 288 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 YPEL1O60688 119 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 ATG12O94817 140 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 SCGB1D2O95969 90 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 IGKV1-39P01597 117 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 IGKV1D-39P04432 117 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 FAM87AP0C7U9 286 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 SEC11BP0C7V7 166 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 MUC1P15941 1255 aaPredicted RBP4.64□□□□□ -1.67
NEK3-211ENST00000629912 TNFRSF1AP19438 455 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 CA7P43166 264 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 GABRA2P47869 451 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 SULT1A2P50226 295 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 CASP6P55212 293 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 PAX9P55771 341 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 BLOC1S1P78537 153 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 TNFAIP6P98066 277 aaPredicted RBP4.64□□□□□ -1.67
NEK3-211ENST00000629912 ADIPOQQ15848 244 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 SPRNQ5BIV9 151 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 CXorf66Q5JRM2 361 aaPredicted RBP4.64□□□□□ -1.67
NEK3-211ENST00000629912 TOR2AQ5JU69 321 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 TEX36Q5VZQ5 186 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 RPL7L1Q6DKI1 246 aaKnown RBP4.64□□□□□ -1.67
NEK3-211ENST00000629912 THOC7Q6I9Y2 204 aaKnown RBP4.64□□□□□ -1.67
NEK3-211ENST00000629912 ALKBH2Q6NS38 261 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 VHLLQ6RSH7 139 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 UQCC3Q6UW78 93 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 ZNF788Q6ZQV5 615 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 WFDC8Q8IUA0 241 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms