RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 RCC2Q9P258 522 aaKnown RBP4.13□□□□□ -1.75
LINC00649-220ENST00000628906 KIF25Q9UIL4 384 aa4.13□□□□□ -1.75
LINC00649-220ENST00000628906 TRBV9A0A0B4J1U6 114 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 ZNF320A2RRD8 509 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 EVPLLA8MZ36 301 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 SLC33A1O00400 549 aaPredicted RBP4.12□□□□□ -1.75
LINC00649-220ENST00000628906 COPEO14579 308 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 SLC31A2O15432 143 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 IDH3BO43837 385 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 MRPS14O60783 128 aaKnown RBP4.12□□□□□ -1.75
LINC00649-220ENST00000628906 SEMG1P04279 462 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 H2BFMP0C1H6 154 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 DNAH10OSP0CZ25 163 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 PRKACAP17612 351 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 GZMHP20718 246 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 FMO3P31513 532 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 PAFAH1B1P43034 410 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 LGALS7P47929 136 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 POLR2JP52435 117 aaKnown RBP4.12□□□□□ -1.75
LINC00649-220ENST00000628906 FXYD3Q14802 87 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 ATXN7L3Q14CW9 347 aaPredicted RBP4.12□□□□□ -1.75
LINC00649-220ENST00000628906 TRAM2Q15035 370 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 OXA1LQ15070 435 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 PTGES3Q15185 160 aaKnown RBP4.12□□□□□ -1.75
LINC00649-220ENST00000628906 PLGLAQ15195 96 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 ZNF585BQ52M93 769 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 CT45A1Q5HYN5 189 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 Q6P435 159 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 HACD2Q6Y1H2 254 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 ZNF730Q6ZMV8 503 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 ZNF781Q8N8C0 355 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 ZNF114Q8NC26 417 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 CHST4Q8NCG5 386 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 CSNK1G2-AS1Q8NCQ2 148 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 ZNF439Q8NDP4 499 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 PROKR2Q8NFJ6 384 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 BBS1Q8NFJ9 593 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 OR51L1Q8NGJ5 315 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 CT45A3Q8NHU0 189 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 PRRC1Q96M27 445 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 AMELYQ99218 206 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 TSPYL1Q9H0U9 437 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 AKIP1Q9NQ31 210 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 BAG5Q9UL15 447 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 TBC1D24Q9ULP9 559 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 TMEM5Q9Y2B1 443 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 GSTK1Q9Y2Q3 226 aa4.12□□□□□ -1.75
LINC00649-220ENST00000628906 ACOD1A6NK06 481 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 FAM223BA6NKX1 122 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 SMIM23A6NLE4 172 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 FFAR1O14842 300 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 ITM2AO43736 263 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 TUSC2O75896 110 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 DHRS3O75911 302 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 CA2P00918 260 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 REG1AP05451 166 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 CALCBP10092 127 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 IDO1P14902 403 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 BCL3P20749 454 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 HNRNPA3P51991 378 aaKnown RBP4.11□□□□□ -1.75
LINC00649-220ENST00000628906 SNU13P55769 128 aaKnown RBP4.11□□□□□ -1.75
LINC00649-220ENST00000628906 SSBP2P81877 361 aaPredicted RBP4.11□□□□□ -1.75
LINC00649-220ENST00000628906 ATP5G2Q06055 141 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 EXOSC2Q13868 293 aaKnown RBP4.11□□□□□ -1.75
LINC00649-220ENST00000628906 ANKRD39Q53RE8 183 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 LAMTOR1Q6IAA8 161 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 SSX7Q7RTT5 188 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.11□□□□□ -1.75
LINC00649-220ENST00000628906 FAM223AQ8IWN6 122 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 OFCC1Q8IZS5 231 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 PRR18Q8N4B5 295 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 OR2T4Q8NH00 348 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 CLCC1Q96S66 551 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 CHST5Q9GZS9 411 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 GPR84Q9NQS5 396 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 SDR39U1Q9NRG7 319 aaPredicted RBP4.11□□□□□ -1.75
LINC00649-220ENST00000628906 TMEM14BQ9NUH8 114 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 ZNF586Q9NXT0 402 aa4.11□□□□□ -1.75
LINC00649-220ENST00000628906 PSMC3IPQ9P2W1 217 aaPredicted RBP4.11□□□□□ -1.75
LINC00649-220ENST00000628906 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.11□□□□□ -1.75
LINC00649-220ENST00000628906 TRBV5-7A0A0A0MS05 114 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 FAM230AA0A1W2PPH8 454 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 B2RBV5 119 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 C15orf65H3BRN8 121 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 SDCBPO00560 298 aaPredicted RBP4.1□□□□□ -1.75
LINC00649-220ENST00000628906 SLC22A1O15245 554 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 KRT36O76013 467 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 ABHD2P08910 425 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 ZNF44P15621 663 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 H2AFXP16104 143 aaPredicted RBP4.1□□□□□ -1.75
LINC00649-220ENST00000628906 KRT4P19013 534 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 GALP22466 123 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 RPL14P50914 215 aaKnown RBP4.1□□□□□ -1.75
LINC00649-220ENST00000628906 RHOGP84095 191 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 SCN1BQ07699 218 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 RSBN1Q5VWQ0 802 aaPredicted RBP4.1□□□□□ -1.75
LINC00649-220ENST00000628906 SPATA4Q8NEY3 305 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 OR52L2PQ8NGH6 319 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 OR9I1Q8NGQ6 314 aa4.1□□□□□ -1.75
LINC00649-220ENST00000628906 GRPEL2Q8TAA5 225 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms