RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 FGF2P09038 288 aa10.53□□□□□ -0.72
SYNGAP1-207ENST00000628646 ZNF16P17020 682 aaPredicted RBP10.53□□□□□ -0.72
SYNGAP1-207ENST00000628646 SUPT4H1P63272 117 aaKnown RBP10.53□□□□□ -0.72
SYNGAP1-207ENST00000628646 MBNL2Q5VZF2 373 aaKnown RBP10.53□□□□□ -0.72
SYNGAP1-207ENST00000628646 FAM71E2Q8N5Q1 922 aa10.53□□□□□ -0.72
SYNGAP1-207ENST00000628646 LINC00052Q96N35 136 aa10.53□□□□□ -0.72
SYNGAP1-207ENST00000628646 SDHAF2Q9NX18 166 aa10.53□□□□□ -0.72
SYNGAP1-207ENST00000628646 A0A1W2PPH5 198 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 GNB2P62879 340 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 ZNF345Q14585 488 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 LINC00596Q86U02 117 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 KCNRGQ8N5I3 272 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 SECTM1Q8WVN6 248 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 NRGNQ92686 78 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 ABCA1O95477 2261 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 LOC105371267A0A1B0GV96 52 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 KITLGP21583 273 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 BLOC1S1P78537 153 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 PIGYQ3MUY2 71 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 RTN4IP1Q8WWV3 396 aaPredicted RBP10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 ARL11Q969Q4 196 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 RAB39BQ96DA2 213 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 SLC25A32Q9H2D1 315 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 WNT9BO14905 357 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 RHBDL1O75783 438 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 MOB1BQ7L9L4 216 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 RTBDNQ9BSG5 229 aaPredicted RBP10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 SLC25A31Q9H0C2 315 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 ONECUT1Q9UBC0 465 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 GPR132Q9UNW8 380 aa10.52□□□□□ -0.73
SYNGAP1-207ENST00000628646 POM121CA8CG34 1229 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 GEMIN2O14893 280 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 HAND1O96004 215 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 PI3P19957 117 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 EIF4E3Q8N5X7 224 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 Q96M66 194 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 WIPI2Q9Y4P8 454 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 TLN2Q9Y4G6 2542 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 DEFB108AA8MXU0 73 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 SHISA9B4DS77 424 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 PHF1O43189 567 aaPredicted RBP10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 PIGPP57054 158 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 C3orf36Q3SXR2 165 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 OR10J5Q8NHC4 309 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 ZNF665Q9H7R5 613 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 PLEKHA2Q9HB19 425 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 NUP50Q9UKX7 468 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 KRBOX1C9JBD0 128 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 CEBPDP49716 269 aaPredicted RBP10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 LGALS4P56470 323 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 PHLDA2Q53GA4 152 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 CALHM1Q8IU99 346 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 SPOCK3Q9BQ16 436 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 DSCAMO60469 2012 aa10.51□□□□□ -0.73
SYNGAP1-207ENST00000628646 TRBV6-7A0A0A0MS04 114 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 LGALS8O00214 317 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 SPINT2O43291 252 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 BCL2L11O43521 198 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 ZP3P21754 424 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 MDH2P40926 338 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 NPBWR2P48146 333 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 BAMBIQ13145 260 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 DAZAP2Q15038 168 aaPredicted RBP10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 OVCH2Q7RTZ1 564 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 NMES1Q9C002 83 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 AK3Q9UIJ7 227 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 IGKV1D-8A0A087WSZ0 117 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 GPR137BO60478 399 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 SOD3P08294 240 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 PRDX2P32119 198 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 AKR1C2P52895 323 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 TUSC1Q2TAM9 212 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 RFESDQ8TAC1 157 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 IL36GQ9NZH8 169 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 KIAA2026Q5HYC2 2103 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 ST8SIA3O43173 380 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 RBM11P57052 281 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 COLCA1Q6ZS62 124 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 RNF141Q8WVD5 230 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 RNF126Q9BV68 326 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 SHARPINQ9H0F6 387 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 RASL12Q9NYN1 266 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 IGKV1-27A0A075B6S5 117 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 LUMP51884 338 aaPredicted RBP10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 EFNA4P52798 201 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 IL15RAQ13261 267 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 MALRD1Q5VYJ5 2156 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 STPG2Q8N412 459 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 STOML3Q8TAV4 291 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 ST8SIA2Q92186 375 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 ERGIC1Q969X5 290 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 TREM1Q9NP99 234 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 ZNF581Q9P0T4 197 aa10.5□□□□□ -0.73
SYNGAP1-207ENST00000628646 LOC400499M0QZD8 3231 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 TRGV10A0A0A0MS01 117 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 H0YIZ8 118 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 NKX6-1P78426 367 aaPredicted RBP10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 KRBOX4Q5JUW0 171 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 PKIBQ9C010 78 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 CHODLQ9H9P2 273 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms