RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 CT45A3Q8NHU0 189 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 CYGBQ8WWM9 190 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 THRSPQ92748 146 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 Q96M66 194 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 DERL3Q96Q80 235 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 OR14A2Q96R54 314 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 RASL11BQ9BPW5 248 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 CHCHD6Q9BRQ6 235 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 DCLRE1BQ9H816 532 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 MBNL3Q9NUK0 354 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 CNOT2Q9NZN8 540 aaKnown RBP9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 GNG12Q9UBI6 72 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 PEX16Q9Y5Y5 336 aa9.78□□□□□ -0.84
SOX2-OT-247ENST00000628347 ZNF736B4DX44 427 aaPredicted RBP9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 EBAG9O00559 213 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 IGHG4P01861 327 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 IGF1P05019 195 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 RPLP1P05386 114 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 MGMTP16455 207 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 FUT3P21217 361 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 ST3GAL4Q11206 333 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 DOC2BQ14184 412 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 LY6G6FQ5SQ64 297 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 AWAT2Q6E213 333 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 C11orf87Q6NUJ2 197 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 DHRSXQ8N5I4 330 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 NKAIN3Q8N8D7 197 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 OR8U1Q8NH10 309 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 OR1L1Q8NH94 360 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 KCTD12Q96CX2 325 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 UQCC2Q9BRT2 126 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 GHRLQ9UBU3 117 aa9.77□□□□□ -0.85
SOX2-OT-247ENST00000628347 RAMP3O60896 148 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 MAS1P04201 325 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 RCC1P18754 421 aaPredicted RBP9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 SOX6P35712 828 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 CAPGP40121 348 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 F2RL1P55085 397 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 HTD2P86397 168 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 DGCR2P98153 550 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 CD69Q07108 199 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 LSAMPQ13449 338 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 MORN2Q502X0 79 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 SIGIRRQ6IA17 410 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 OR10V1Q8NGI7 309 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 FBLIM1Q8WUP2 373 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 HSPB9Q9BQS6 159 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 SELENOIQ9C0D9 397 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 BANF2Q9H503 90 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 TAF9BQ9HBM6 251 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 PLCXD1Q9NUJ7 323 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 JPT1Q9UK76 154 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
SOX2-OT-247ENST00000628347 A0A1W2PPK0 400 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 PDCD6O75340 191 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 CRTAPO75718 401 aaPredicted RBP9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 OR5H8P0DN80 308 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 VDAC1P21796 283 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 MAPK3P27361 379 aaPredicted RBP9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 PSMB8P28062 276 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 WNT4P56705 351 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 FHL3Q13643 280 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 C6orf141Q5SZD1 244 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 C9orf66Q5T8R8 295 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 LAIR2Q6ISS4 152 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 OR5M8Q8NGP6 311 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 MRPL30Q8TCC3 161 aaKnown RBP9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 MYOZ3Q8TDC0 251 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 C4orf3Q8WVX3 66 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 DUX3Q96PT4 197 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 ABHD14AQ9BUJ0 271 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 KCNIP1Q9NZI2 227 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 PSORS1C1Q9UIG5 152 aa9.75□□□□□ -0.85
SOX2-OT-247ENST00000628347 PNMA8CA0A1B0GUJ8 204 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 UBE2QL1A1L167 161 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 MYL12BO14950 172 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 YPEL1O60688 119 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 UBBP0CG47 229 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 CELP19835 753 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 LRRC36Q1X8D7 754 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 LCNL1Q6ZST4 164 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 ODF3L1Q8IXM7 274 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 C8orf59Q8N0T1 100 aaPredicted RBP9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 PRR18Q8N4B5 295 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 NANOGP1Q8N7R0 232 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 TFAP2CQ92754 450 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 KCTD7Q96MP8 289 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 YPEL2Q96QA6 119 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 NABP2Q9BQ15 211 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 CST11Q9H112 138 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 OR2S2Q9NQN1 319 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 FKBP14Q9NWM8 211 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 ZNF107Q9UII5 783 aaPredicted RBP9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 LRRC42Q9Y546 428 aa9.74□□□□□ -0.85
SOX2-OT-247ENST00000628347 RGS11O94810 467 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 HLA-DRB1P01911 266 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 CHATP28329 748 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 PPIFP30405 207 aaKnown RBP9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 RUNX1Q01196 453 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms