RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 LIN7CQ9NUP9 197 aaKnown RBP9.56□□□□□ -0.88
UBR1-212ENST00000627960 NKX1-2Q9UD57 310 aaPredicted RBP9.56□□□□□ -0.88
UBR1-212ENST00000627960 LINC00527Q9UJ94 153 aa9.56□□□□□ -0.88
UBR1-212ENST00000627960 LSM2Q9Y333 95 aaKnown RBP9.56□□□□□ -0.88
UBR1-212ENST00000627960 ZNF736B4DX44 427 aaPredicted RBP9.55□□□□□ -0.88
UBR1-212ENST00000627960 TXNL1O43396 289 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 PDCD6O75340 191 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 MPIG6BO95866 241 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 MOSP00540 346 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 VSIG8P0DPA2 414 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 GPR12P47775 334 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 SLC35B1P78383 322 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 SPHARQ15513 63 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 MORN2Q502X0 79 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 C1orf100Q5SVJ3 147 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 FAM27D1Q5T7N8 215 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 STEAP3Q658P3 488 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 GLT8D1Q68CQ7 371 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 C5orf24Q7Z6I8 188 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 ZNF554Q86TJ5 538 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 STPG2Q8N412 459 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 COMMD1Q8N668 190 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 S1PR3Q99500 378 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 TMED9Q9BVK6 235 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 ABCG5Q9H222 651 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 OR2S2Q9NQN1 319 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 MBNL3Q9NUK0 354 aaKnown RBP9.55□□□□□ -0.88
UBR1-212ENST00000627960 SCN3BQ9NY72 215 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 KCNIP1Q9NZI2 227 aa9.55□□□□□ -0.88
UBR1-212ENST00000627960 AP4M1O00189 453 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 DUS4LO95620 317 aaKnown RBP9.54□□□□□ -0.88
UBR1-212ENST00000627960 CD37P11049 281 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 SRMP19623 302 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 RPS27AP62979 156 aaKnown RBP9.54□□□□□ -0.88
UBR1-212ENST00000627960 IRF3Q14653 427 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 NKAPLQ5M9Q1 402 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 RBM48Q5RL73 367 aaKnown RBP9.54□□□□□ -0.88
UBR1-212ENST00000627960 ETV3LQ6ZN32 361 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 C18orf65Q6ZTR6 163 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 OR2W3Q7Z3T1 314 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 CEACAM19Q7Z692 300 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 LINC00482Q8N8I6 264 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 OR51D1Q8NGF3 324 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 OR8H1Q8NGG4 311 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 OR52L2PQ8NGH6 319 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 NRG4Q8WWG1 115 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 NEDD4LQ96PU5 975 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 RASL11BQ9BPW5 248 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 JPT1Q9UK76 154 aa9.54□□□□□ -0.88
UBR1-212ENST00000627960 LANCL1O43813 399 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 CHATP28329 748 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 SLC6A1P30531 599 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 MYCNOSP40205 109 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 THBS3P49746 956 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 F2RL1P55085 397 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 AQP4P55087 323 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 HTD2P86397 168 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 GNMTQ14749 295 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 MED22Q15528 200 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 PNLIPRP3Q17RR3 467 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 HSD17B12Q53GQ0 312 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 LY6G6FQ5SQ64 297 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 OR10K2Q6IF99 312 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 TEX38Q6PEX7 206 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 MRPL41Q8IXM3 137 aaKnown RBP9.53□□□□□ -0.88
UBR1-212ENST00000627960 KCNG3Q8TAE7 436 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 RBMXL1Q96E39 390 aaKnown RBP9.53□□□□□ -0.88
UBR1-212ENST00000627960 SULT4A1Q9BR01 284 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 FAAP24Q9BTP7 215 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 GON7Q9BXV9 100 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 TPRKBQ9Y3C4 175 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 LRRC42Q9Y546 428 aa9.53□□□□□ -0.88
UBR1-212ENST00000627960 NUDT19A8MXV4 375 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 SLC22A1O15245 554 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 YPEL1O60688 119 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 UCHL1P09936 223 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 HTR2CP28335 458 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 PPP1CCP36873 323 aaKnown RBP9.52□□□□□ -0.89
UBR1-212ENST00000627960 KRTAP10-11P60412 298 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 QRFPP83859 136 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 UNC119Q13432 240 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 LSAMPQ13449 338 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 HMGN3Q15651 99 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 C8orf86Q6ZUL3 223 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 C6orf201Q7Z4U5 140 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 ODF3L1Q8IXM7 274 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 FAM71E2Q8N5Q1 922 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 KLHL30-AS1Q8NEE0 82 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 UFD1Q92890 307 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 YPEL2Q96QA6 119 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 NICN1Q9BSH3 213 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 ABHD14AQ9BUJ0 271 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 TM2D1Q9BX74 207 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 TMEM59Q9BXS4 323 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 DUSP21Q9H596 190 aa9.52□□□□□ -0.89
UBR1-212ENST00000627960 TMEM14DPA8MWL7 114 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 K7EIL1 84 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 RGS11O94810 467 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 BPNT1O95861 308 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 RPLP1P05386 114 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms