RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 PPOXP50336 477 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TEX36Q5VZQ5 186 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 PRR18Q8N4B5 295 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 C12orf45Q8N5I9 185 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 SPICQ8N5J4 248 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 UXS1Q8NBZ7 420 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 DEFB108BQ8NET1 73 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 OR5D13Q8NGL4 314 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 OR10J5Q8NHC4 309 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 IL1F10Q8WWZ1 152 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TMEM158Q8WZ71 300 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 MOB3AQ96BX8 217 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 KIRREL1Q96J84 757 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 DMRTB1Q96MA1 342 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 VRK1Q99986 396 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 REG4Q9BYZ8 158 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TAF9BQ9HBM6 251 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TMEM106BQ9NUM4 274 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 MGAT4CQ9UBM8 478 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 LAMP3Q9UQV4 416 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 COL6A5A8TX70 2615 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 ANK3Q12955 4377 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 PPIAL4EA0A075B759 164 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TRBV6-7A0A0A0MS04 114 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TRAV38-1A0A0B4J264 116 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 IGHV1-69-2A0A0G2JMI3 117 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 RNF212BA8MTL3 300 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 PPIAL4DF5H284 164 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TMEM178BH3BS89 294 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 K7N7A8 449 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 LGALS8O00214 317 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 CD5LO43866 347 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TUSC2O75896 110 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 CD8AP01732 235 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 PPIAL4FP0DN26 164 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 AADACP22760 399 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 GLIPR1P48060 266 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 NKX2-5P52952 324 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 UCP3P55916 312 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 EDDM3AQ14507 147 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 HMGN3Q15651 99 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 ZFP69Q49AA0 526 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 C6orf183Q5T699 404 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 C11orf71Q6IPW1 123 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TPRX1Q8N7U7 411 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 ZNRF1Q8ND25 227 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 OR2AK2Q8NG84 335 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 SDSLQ96GA7 329 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 PHB2Q99623 299 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 ZNF665Q9H7R5 613 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 CBLN4Q9NTU7 201 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 PIPOXQ9P0Z9 390 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 PPIAL4AQ9Y536 164 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 TLN2Q9Y4G6 2542 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 IGKV1D-13A0A0B4J2D9 117 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 NKX6-3A6NJ46 265 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 NPIPB11E5RHQ5 1161 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 RNF223E7ERA6 249 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 SMLR1H3BR10 107 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 HSPA12AO43301 675 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 DUS4LO95620 317 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 GYPAP02724 150 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 IGKV1-13P0DP09 117 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 CD34P28906 385 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 H2BFSP57053 126 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 ABCA11PQ4W5N1 156 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 LY6G6FQ5SQ64 297 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 FAM53AQ6NSI3 398 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 LPCAT3Q6P1A2 487 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 C11orf88Q6PI97 169 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 TRAT1Q6PIZ9 186 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 SLC38A6Q8IZM9 456 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 UBALD1Q8TB05 177 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 CASTOR1Q8WTX7 329 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 MITD1Q8WV92 249 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 GALMQ96C23 342 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 DCTN5Q9BTE1 182 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 ZNF436Q9C0F3 470 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 DNTTIP1Q9H147 329 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 OR1A1Q9P1Q5 309 aa7.88□□□□□ -1.15
PDLIM5-223ENST00000627587 C12orf77C9JDV5 145 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 TNFRSF13BO14836 293 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 SLC22A5O76082 557 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 SFT2D2O95562 160 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 SOD3P08294 240 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 DANCRP0C864 163 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 IL2RGP31785 369 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 EDDM3BP56851 147 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 PIGPP57054 158 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 KRTAP1-1Q07627 177 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 HFEQ30201 348 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 DCAF12L2Q5VW00 463 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 ZNF788Q6ZQV5 615 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 SGPP2Q8IWX5 399 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 FGFRL1Q8N441 504 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 ZNF565Q8N9K5 539 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 OR13A1Q8NGR1 328 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 MRGPRDQ8TDS7 321 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 ZNF486Q96H40 463 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 GAFA1Q96PS6 74 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms