RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 C5orf49A4QMS7 147 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 HSD17B6O14756 317 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 C1QL1O75973 258 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 HLA-HP01893 362 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 OR13C7P0DN81 318 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 MMP9P14780 707 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 F2RL1P55085 397 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 SRPXP78539 464 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 P4HA3Q7Z4N8 544 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 UBALD1Q8TB05 177 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 TMEM222Q9H0R3 208 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 WFDC1Q9HC57 220 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 FAM212BQ9NTI7 297 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 CHD6Q8TD26 2715 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 CACNA1DQ01668 2161 aa6.13□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF462Q96JM2 2506 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF503-AS2A6NEH8 195 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 FBLL1A6NHQ2 334 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 HS3ST1O14792 307 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 SLC25A6P12236 298 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 MAS1LP35410 378 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 TMPRSS3P57727 454 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 LY6DQ14210 128 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 TMEM182Q6ZP80 229 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 ODF3L1Q8IXM7 274 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 MDS2Q8NDY4 140 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 PLPPR1Q8TBJ4 325 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 POM121L2Q96KW2 1035 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 CABLES2Q9BTV7 478 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 CLEC5AQ9NY25 188 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 ABI3Q9P2A4 366 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 RCL1Q9Y2P8 373 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF407Q9C0G0 2248 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 XKRY2A2RUG3 117 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 MKRN2OSH3BPM6 223 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 SYNGR4O95473 234 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 TK1P04183 234 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 STAG3L2P0CL84 134 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 DAOP14920 347 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 UCP1P25874 307 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 RAB5CP51148 216 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 GPM6AP51674 278 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 DVL1P1P54792 670 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 MIDNQ504T8 468 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 LGI3Q8N145 548 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF611Q8N823 705 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 CCDC71LQ8N9Z2 235 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 RDH5Q92781 318 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 ERGIC1Q969X5 290 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 PRELID3BQ9Y3B1 194 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 PUS1Q9Y606 427 aaKnown RBP eCLIP6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 TRDCB7Z8K6 153 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 PPYP01298 95 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF14P17017 642 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 SNCAP37840 140 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 FHITP49789 147 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 PLP2Q04941 152 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 HERPUD1Q15011 391 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 NMSQ5H8A3 153 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 OR8U1Q8NH10 309 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 OPN3Q9H1Y3 402 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 TUBA4BQ9H853 241 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 KCNJ16Q9NPI9 418 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 SLC7A10Q9NS82 523 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 TREM2Q9NZC2 230 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 CRIM1Q9NZV1 1036 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 CACFD1Q9UGQ2 172 aa6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 POLR3KQ9Y2Y1 108 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-244ENST00000627109 H3BP45 60 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 CST7O76096 145 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 OPN1MWP04001 364 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 OPN1MW2P0DN77 364 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 OPN1MW3P0DN78 364 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF44P15621 663 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 AADACP22760 399 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 S100GP29377 79 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 UBE2G2P60604 165 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 B2MP61769 119 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 POLR2GP62487 172 aaKnown RBP eCLIP6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 HMGN3Q15651 99 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 SHEQ5VZ18 495 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 OR5A2Q8NGI9 324 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 OR51H1Q8NH63 302 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 TP53RKQ96S44 253 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 SMDT1Q9H4I9 107 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 KCNS2Q9ULS6 477 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 C9JQL5 133 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 TRAPPC2LH3BP13 241 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 MPPED1O15442 326 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 SSSCA1O60232 199 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 PITX3O75364 302 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 ACAA1P09110 424 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 NHLH2Q02577 135 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 C3AR1Q16581 482 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 AVPI1Q5T686 147 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 PCSK4Q6UW60 755 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 ETV3LQ6ZN32 361 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 C5orf24Q7Z6I8 188 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 OR5P3Q8WZ94 311 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 ISOC2Q96AB3 205 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms