RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 TMEM230Q96A57 120 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 ZNF436Q9C0F3 470 aaPredicted RBP6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 RANGRFQ9HD47 186 aaPredicted RBP6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 SLC2A9Q9NRM0 540 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 RDH8Q9NYR8 311 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 TAS2R3Q9NYW6 316 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 CALYQ9NYX4 217 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 OR1A1Q9P1Q5 309 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 MIOXQ9UGB7 285 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 SHPKQ9UHJ6 478 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 JPT1Q9UK76 154 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 UBE2J1Q9Y385 318 aaPredicted RBP6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 RBM7Q9Y580 266 aaKnown RBP6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 LINC00312Q9Y6C7 94 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 HCFC1P51610 2035 aa6.26□□□□□ -1.41
PTP4A1-206ENST00000627002 TRBV23-1A0A0A0MS06 115 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 IGKV1D-13A0A0B4J2D9 117 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 PIGBOS1A0A0B4J2F0 54 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 KBTBD11-OT1A0A1B0GTJ5 212 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 A0A1B0GW55 424 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 ZNF729A6NN14 1252 aaPredicted RBP6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 A8MV72 311 aaPredicted RBP6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 LYNX1G3V0Z9 82 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 BOLA2-SMG1P6H3BVE0 249 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 OVOL3O00110 214 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 F2RL2O00254 374 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 DVL1O14640 695 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 MPPED1O15442 326 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 PPIHO43447 177 aaKnown RBP6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 RGS11O94810 467 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 GIPP09681 153 aaPredicted RBP6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 DUX4L2P0CJ85 424 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 DUX4L3P0CJ86 424 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 DUX4L4P0CJ87 422 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 DUX4L5P0CJ88 424 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 DUX4L6P0CJ89 424 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 DUX4L7P0CJ90 424 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 CGB3P0DN86 165 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 CGB7P0DN87 165 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 IGKV1-13P0DP09 117 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 LYNX1P0DP58 116 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 HLA-GP17693 338 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 CXCL3P19876 107 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 GNRHRP30968 328 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 SSTR5P35346 364 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 RIPPLY3P57055 190 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 RAP2BP61225 183 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 RPL31P62899 125 aaKnown RBP6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 SRPXP78539 464 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 CD300CQ08708 224 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 SLC9A3R2Q15599 337 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 ZFP69Q49AA0 526 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 DUX4L9Q6RFH8 374 aaPredicted RBP6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 LYPD2Q6UXB3 125 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 KCTD9Q7L273 389 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 NLRC3Q7RTR2 1065 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 C5orf24Q7Z6I8 188 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 UXS1Q8NBZ7 420 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 ZBTB34Q8NCN2 500 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 BVESQ8NE79 360 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 OR10A7Q8NGE5 316 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 RTN4IP1Q8WWV3 396 aaPredicted RBP6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 EDARADDQ8WWZ3 215 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 GALNT14Q96FL9 552 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 AKR1E2Q96JD6 320 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 SUCNR1Q9BXA5 334 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 GAL3ST2Q9H3Q3 398 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 NAA60Q9H7X0 242 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 PLEKHF2Q9H8W4 249 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 LINC00574Q9H8X3 128 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 OR2S2Q9NQN1 319 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 GNG12Q9UBI6 72 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 DUX4Q9UBX2 424 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 CLN8Q9UBY8 286 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 PRR14LQ5THK1 2151 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 ADGRG4Q8IZF6 3080 aa6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 HEATR1Q9H583 2144 aaKnown RBP6.25□□□□□ -1.41
PTP4A1-206ENST00000627002 A0A1W2PPH5 198 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 A1L4Q6 167 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 RNF212BA8MTL3 300 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 GOSR2O14653 212 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 ITGB1BP1O14713 200 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 HSD17B6O14756 317 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 YPEL1O60688 119 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 OR2A4O95047 310 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 CLDN1O95832 211 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 C1QBP02746 253 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 WNT2P09544 360 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 OR8U9P0C7N5 309 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 RPS2P15880 293 aaKnown RBP6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 CDKN1AP38936 164 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 EIF2B2P49770 351 aaKnown RBP6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 SUPT4H1P63272 117 aaKnown RBP6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 C17orf58Q2M2W7 97 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 PHLDA2Q53GA4 152 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 LY6G6FQ5SQ64 297 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 SP5Q6BEB4 398 aaPredicted RBP6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 ZNF818PQ6ZRF7 136 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 TBC1D26Q86UD7 250 aa6.24□□□□□ -1.41
PTP4A1-206ENST00000627002 LDLRAD3Q86YD5 345 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms