RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 EGR2P11161 476 aaPredicted RBP8.52□□□□□ -1.05
DDX41-218ENST00000625286 IGFBP3P17936 291 aaPredicted RBP8.52□□□□□ -1.05
DDX41-218ENST00000625286 BLVRBP30043 206 aaPredicted RBP8.52□□□□□ -1.05
DDX41-218ENST00000625286 ZNF93P35789 620 aaPredicted RBP8.52□□□□□ -1.05
DDX41-218ENST00000625286 GBX2P52951 348 aaPredicted RBP8.52□□□□□ -1.05
DDX41-218ENST00000625286 ACTBP60709 375 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 MMDQ15546 238 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 Q3ZCU0 254 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 SLC22A6Q4U2R8 563 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 MORN2Q502X0 79 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 DDI2Q5TDH0 399 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 ZFAND6Q6FIF0 208 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 SIGIRRQ6IA17 410 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 Q8N1Y9 231 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 OR52L2PQ8NGH6 319 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 TMEM106AQ96A25 262 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 CITED4Q96RK1 184 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 MRPL20Q9BYC9 149 aaKnown RBP8.52□□□□□ -1.05
DDX41-218ENST00000625286 TMEM138Q9NPI0 162 aa8.52□□□□□ -1.05
DDX41-218ENST00000625286 MRPS18AQ9NVS2 196 aaKnown RBP8.52□□□□□ -1.05
DDX41-218ENST00000625286 TRAV8-7A0A075B6U6 113 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 TRAV41A0A0B4J266 112 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 FCN1O00602 326 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 SAP30O75446 220 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 FADS2O95864 444 aaKnown RBP8.51□□□□□ -1.05
DDX41-218ENST00000625286 HLA-DRB1P01911 266 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 GP9P14770 177 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 IL3RAP26951 378 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 OR3A3P47888 321 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 ETV1P50549 477 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 ALDH3A2P51648 485 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 RPS11P62280 158 aaKnown RBP eCLIP8.51□□□□□ -1.05
DDX41-218ENST00000625286 SMN1Q16637 294 aaKnown RBP8.51□□□□□ -1.05
DDX41-218ENST00000625286 MPV17LQ2QL34 196 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 OR2G6Q5TZ20 316 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 ACSM6Q6P461 480 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 TMEM65Q6PI78 240 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 LINC00596Q86U02 117 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 HAPLN4Q86UW8 402 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 LYPD6Q86Y78 171 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 PRR18Q8N4B5 295 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 GPR148Q8TDV2 347 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 ZNF184Q99676 751 aaPredicted RBP8.51□□□□□ -1.05
DDX41-218ENST00000625286 SLC29A1Q99808 456 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 NABP2Q9BQ15 211 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 TM2D3Q9BRN9 247 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 CHCHD6Q9BRQ6 235 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 TOLLIPQ9H0E2 274 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 EDA2RQ9HAV5 297 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 PARP11Q9NR21 331 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 GNG12Q9UBI6 72 aa8.51□□□□□ -1.05
DDX41-218ENST00000625286 IGHV4OR15-8A0A075B7B6 117 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 A0A087WW49 117 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 TRBV5-5A0A0J9YX44 114 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 OGG1O15527 345 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 TXNL1O43396 289 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 SC5DO75845 299 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 CSTBP04080 98 aaKnown RBP8.5□□□□□ -1.05
DDX41-218ENST00000625286 OR5H8P0DN80 308 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 GTF2F2P13984 249 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 BDKRB2P30411 391 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 PPP1CCP36873 323 aaKnown RBP8.5□□□□□ -1.05
DDX41-218ENST00000625286 RAB40BQ12829 278 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 MRPL28Q13084 256 aaKnown RBP8.5□□□□□ -1.05
DDX41-218ENST00000625286 C5orf64Q2M2E5 130 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 FAM27D1Q5T7N8 215 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 STEAP3Q658P3 488 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 RPL22L1Q6P5R6 122 aaKnown RBP8.5□□□□□ -1.05
DDX41-218ENST00000625286 ADAMTSL5Q6ZMM2 481 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 CBR4Q8N4T8 237 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 NPBQ8NG41 125 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 NEK7Q8TDX7 302 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 ARPC1AQ92747 370 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 BANF2Q9H503 90 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 TAF9BQ9HBM6 251 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 ETAA1Q9NY74 926 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 TRAPPC2LQ9UL33 140 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 GMPPBQ9Y5P6 360 aa8.5□□□□□ -1.05
DDX41-218ENST00000625286 UBE2QL1A1L167 161 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 NBR2O15453 112 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 SPINT2O43291 252 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 WBP4O75554 376 aaKnown RBP8.49□□□□□ -1.05
DDX41-218ENST00000625286 GPX5O75715 221 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 NDUFA3O95167 84 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 GABPB1Q06547 395 aaPredicted RBP8.49□□□□□ -1.05
DDX41-218ENST00000625286 DOC2BQ14184 412 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 RAB12Q6IQ22 244 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 LIN54Q6MZP7 749 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 GLIPR1L1Q6UWM5 242 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 ZNF833PQ6ZTB9 187 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 MUL1Q969V5 352 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 CPNE2Q96FN4 548 aaPredicted RBP8.49□□□□□ -1.05
DDX41-218ENST00000625286 MRPL48Q96GC5 212 aaKnown RBP8.49□□□□□ -1.05
DDX41-218ENST00000625286 ZNF251Q9BRH9 671 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 FGF20Q9NP95 211 aaPredicted RBP8.49□□□□□ -1.05
DDX41-218ENST00000625286 OR2S2Q9NQN1 319 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 MBNL3Q9NUK0 354 aaKnown RBP8.49□□□□□ -1.05
DDX41-218ENST00000625286 C19orf73Q9NVV2 129 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 FAM53CQ9NYF3 392 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 CLEC2DQ9UHP7 191 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms