RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ATPIF1Q9UII2 106 aa2.24□□□□□ -2.05
CDKL5-208ENST00000624953 ZNF391Q9UJN7 358 aa2.24□□□□□ -2.05
CDKL5-208ENST00000624953 CHTOPQ9Y3Y2 248 aaKnown RBP2.24□□□□□ -2.05
CDKL5-208ENST00000624953 DNAH11Q96DT5 4516 aa2.24□□□□□ -2.05
CDKL5-208ENST00000624953 NACAE9PAV3 2078 aa2.24□□□□□ -2.05
CDKL5-208ENST00000624953 PRSS37A4D1T9 235 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 C17orf98A8MV24 154 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 C5orf58C9J3I9 102 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 F5H5K5 113 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 CDIPTO14735 213 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 NDUFB3O43676 98 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 GMDSO60547 372 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SLC16A7O60669 478 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RAMP3O60896 148 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SNNO75324 88 aaPredicted RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 MMP23AO75900 390 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 ANP32DO95626 131 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 IFNW1P05000 195 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 IL6P05231 212 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 DNAH10OSP0CZ25 163 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SLC2A1P11166 492 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 PSG2P11465 335 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 GALP22466 123 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 ACKR3P25106 362 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RBM34P42696 430 aaKnown RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 MRPL19P49406 292 aaKnown RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 DYNLT3P51808 116 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SLC25A1P53007 311 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SLC18A1P54219 525 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 PRRX1P54821 245 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 MTPNP58546 118 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 FAM3AP98173 230 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 LIPEQ05469 1076 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 KCNJ8Q15842 424 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SSX2Q16385 188 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 MICBQ29980 383 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RFX4Q33E94 735 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 LRRC10Q5BKY1 277 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RNLSQ5VYX0 342 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 TBPL2Q6SJ96 375 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 PGAP1Q75T13 922 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SLC36A1Q7Z2H8 476 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SLC25A42Q86VD7 318 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 OR6V1Q8N148 313 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 OSR2Q8N2R0 312 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 KLHL30-AS1Q8NEE0 82 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SLC26A10Q8NG04 563 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 OR4M1Q8NGD0 313 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 OR52H1Q8NGJ2 320 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 OR9Q1Q8NGQ5 310 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 OR51A7Q8NH64 312 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RPS4Y2Q8TD47 263 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RPL3LQ92901 407 aaKnown RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 HIST1H2ACQ93077 130 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 C12orf43Q96C57 262 aaKnown RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 BPIFA2Q96DR5 249 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 MRPL53Q96EL3 112 aaKnown RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RBP7Q96R05 134 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 HCAR1Q9BXC0 346 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 HDHD2Q9H0R4 259 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 DNTTIP1Q9H147 329 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 VCX2Q9H322 139 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 YY1AP1Q9H869 796 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RETNQ9HD89 108 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RPRD1BQ9NQG5 326 aaKnown RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 THUMPD1Q9NXG2 353 aaKnown RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 VNN3Q9NY84 501 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 CYB5R1Q9UHQ9 305 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 LINC00527Q9UJ94 153 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 RIMS3Q9UJD0 308 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 HHLA2Q9UM44 414 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 ZNF256Q9Y2P7 627 aaPredicted RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 SH3GLB1Q9Y371 365 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 N6AMT1Q9Y5N5 214 aa2.23□□□□□ -2.05
CDKL5-208ENST00000624953 APOBP04114 4563 aaKnown RBP2.23□□□□□ -2.05
CDKL5-208ENST00000624953 A0A087WUU8 490 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 GMNCA6NCL1 334 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 PRORSD1PA6NEY8 169 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 OR2AT4A6NND4 320 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 K7EQM0 130 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 M0R135 149 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 BHLHE40O14503 412 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 PHOX2AO14813 284 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 POLR3GO15318 223 aaPredicted RBP2.22□□□□□ -2.05
CDKL5-208ENST00000624953 DEDDO75618 318 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 ARG1P05089 322 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 CD14P08571 375 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 IGHV1-8P0DP01 117 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 IFI30P13284 250 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 IDO1P14902 403 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 SPNP16150 400 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 AZU1P20160 251 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 MYCNOSP40205 109 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 GPR4P46093 362 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 OR3A4PP47883 348 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 EWSR1Q01844 656 aaKnown RBP eCLIP2.22□□□□□ -2.05
CDKL5-208ENST00000624953 PRKCDQ05655 676 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 ECH1Q13011 328 aa2.22□□□□□ -2.05
CDKL5-208ENST00000624953 KRR1Q13601 381 aaKnown RBP2.22□□□□□ -2.05
CDKL5-208ENST00000624953 WHAMMP3Q1A5X7 153 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms