RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 UBE2ZQ9H832 354 aaPredicted RBP12.04□□□□□ -0.48
LDB3-209ENST00000623056 SLC39A9Q9NUM3 307 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 SEMA5BQ9P283 1151 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 CACNG5Q9UF02 275 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 ZNF816-ZNF321PA0A0X1KG74 233 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 TMEM250H0YL14 139 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 DKK1O94907 266 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 IGKV1D-33P01593 117 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 IGKV1-33P01594 117 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 TYMSP04818 313 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 SERPINE2P07093 398 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 CST2P09228 141 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 BCL3P20749 454 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 HBG1P69891 147 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 HBG2P69892 147 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 KRTAP27-1Q3LI81 207 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 TRIM61Q5EBN2 209 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 RPP25LQ8N5L8 163 aaKnown RBP12.04□□□□□ -0.48
LDB3-209ENST00000623056 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 OR4C12Q96R67 309 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 ZNF391Q9UJN7 358 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 CHCHD2Q9Y6H1 151 aaPredicted RBP12.04□□□□□ -0.48
LDB3-209ENST00000623056 KIR2DS1A0A191URI9 304 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A10PA6NDY2 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A18PA6NE21 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A16PA6NEW6 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A20PA6NIJ5 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A8PA6NJQ4 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A7PA6NKC0 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 MARCH11A6NNE9 402 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A22PA8MWA6 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A12PA8MX19 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A5PA8MXJ8 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A23PA8MXZ1 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A15PP0C7V4 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A13PP0C7W8 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A14PP0C7W9 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 FAM90A24PP0C7X0 464 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 B4GALT1P15291 398 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 KIR2DS4P43632 304 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 PSMB3P49720 205 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 KIR2DS1Q14954 304 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 TESK1Q15569 626 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 ZNF468Q5VIY5 522 aaPredicted RBP12.03□□□□□ -0.48
LDB3-209ENST00000623056 CISD2Q8N5K1 135 aaKnown RBP12.03□□□□□ -0.48
LDB3-209ENST00000623056 ANAPC16Q96DE5 110 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 REPIN1Q9BWE0 567 aaKnown RBP12.03□□□□□ -0.48
LDB3-209ENST00000623056 GYPAP02724 150 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 CNN1P51911 297 aaKnown RBP12.03□□□□□ -0.48
LDB3-209ENST00000623056 CLDN15P56746 228 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 RAET1LQ5VY80 246 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 Q8NFD4 153 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 TAF15Q92804 592 aaKnown RBP eCLIP12.03□□□□□ -0.48
LDB3-209ENST00000623056 TECTBQ96PL2 329 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 PHF7Q9BWX1 381 aaPredicted RBP12.03□□□□□ -0.48
LDB3-209ENST00000623056 IL36RNQ9UBH0 155 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 ATP23Q9Y6H3 246 aa12.03□□□□□ -0.48
LDB3-209ENST00000623056 ABCA7Q8IZY2 2146 aa12.02□□□□□ -0.48
LDB3-209ENST00000623056 CD300LBA8K4G0 201 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 HMGB3O15347 200 aaKnown RBP12.02□□□□□ -0.49
LDB3-209ENST00000623056 TIAF1O95411 115 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 MBP02144 154 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 CTXN2P0C2S0 81 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 S100GP29377 79 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 SRP14P37108 136 aaKnown RBP12.02□□□□□ -0.49
LDB3-209ENST00000623056 HNRNPKP61978 463 aaKnown RBP eCLIP12.02□□□□□ -0.49
LDB3-209ENST00000623056 PSG4Q00888 419 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 DCAF10Q5QP82 559 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 PCSK4Q6UW60 755 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.02□□□□□ -0.49
LDB3-209ENST00000623056 NEK7Q8TDX7 302 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 GATAD1Q8WUU5 269 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 PARD6GQ9BYG4 376 aaPredicted RBP12.02□□□□□ -0.49
LDB3-209ENST00000623056 TMEM38BQ9NVV0 291 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 NAGKQ9UJ70 344 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 ADAMTS20P59510 1910 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 UBE2L5PA0A1B0GUS4 154 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 IGKV1-39P01597 117 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 IGKV1D-39P04432 117 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 CD27P26842 260 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 RABEPKQ7Z6M1 372 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 OR1K1Q8NGR3 316 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 OR4F5Q8NH21 305 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 OR4F4Q96R69 305 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 DEFB126Q9BYW3 111 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 PLA2G3Q9NZ20 509 aa12.02□□□□□ -0.49
LDB3-209ENST00000623056 IGHV1OR15-9A0A0B4J2B8 117 aa12.01□□□□□ -0.49
LDB3-209ENST00000623056 SRFP11831 508 aa12.01□□□□□ -0.49
LDB3-209ENST00000623056 EDN3P14138 238 aa12.01□□□□□ -0.49
LDB3-209ENST00000623056 KMT5CQ86Y97 462 aa12.01□□□□□ -0.49
LDB3-209ENST00000623056 FGFBP3Q8TAT2 258 aa12.01□□□□□ -0.49
LDB3-209ENST00000623056 SRXN1Q9BYN0 137 aa12.01□□□□□ -0.49
LDB3-209ENST00000623056 WNT5BQ9H1J7 359 aa12.01□□□□□ -0.49
LDB3-209ENST00000623056 SLC25A22Q9H936 323 aa12.01□□□□□ -0.49
LDB3-209ENST00000623056 IL17BQ9UHF5 180 aa12.01□□□□□ -0.49
LDB3-209ENST00000623056 TNFSF11O14788 317 aa12□□□□□ -0.49
LDB3-209ENST00000623056 DLEU1O43261 78 aa12□□□□□ -0.49
LDB3-209ENST00000623056 GALR2O43603 387 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms