RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CT45A3Q8NHU0 189 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 OR51E1Q8TCB6 317 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 THEM6Q8WUY1 208 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 LEAP2Q969E1 77 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SLAMF9Q96A28 289 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 BORCS8Q96FH0 119 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 INTS14Q96SY0 518 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 NICN1Q9BSH3 213 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FUZQ9BT04 418 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 TMEM70Q9BUB7 260 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 MROQ9BYG7 248 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 YTHDF1Q9BYJ9 559 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ROPN1BQ9BZX4 212 aaPredicted RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 PARP12Q9H0J9 701 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 MAGT1Q9H0U3 335 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ADGRL4Q9HBW9 690 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 GPR173Q9NS66 373 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 RBFOX1Q9NWB1 397 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FAM206AQ9NX38 181 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 DNAJC27Q9NZQ0 273 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 CCDC167Q9P0B6 97 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 MLXQ9UH92 298 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 NUFIP1Q9UHK0 495 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 KIF25Q9UIL4 384 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ADAM30Q9UKF2 790 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 BAIAP2Q9UQB8 552 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 GSTK1Q9Y2Q3 226 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 TMED3Q9Y3Q3 217 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FAM32AQ9Y421 112 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 LRRC42Q9Y546 428 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SNX13Q9Y5W8 968 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ENPP4Q9Y6X5 453 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ELOA3CA0A087WX78 387 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 IGHV4-28A0A0C4DH34 117 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 TMEM213A2RRL7 107 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 OR4C46A6NHA9 309 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 J3KTA2 159 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SDCBPO00560 298 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ARPC2O15144 300 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SNNO75324 88 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SPAG7O75391 227 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 GMNNO75496 209 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 TUSC2O75896 110 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 APOL3O95236 402 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF682O95780 498 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 C1QBP02746 253 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 TTRP02766 147 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 MT-ND2P03891 347 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 MT-ND4P03905 459 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SHBGP04278 402 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 REG1AP05451 166 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 CD5P06127 495 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 GSTP1P09211 210 aaKnown RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 P0C879 139 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SPART-AS1P0CW21 52 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 DBTP11182 482 aaKnown RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF44P15621 663 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 PRKACAP17612 351 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 BCL3P20749 454 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 CCL1P22362 96 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 PRKACBP22694 351 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 GCSHP23434 173 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 GLP1RP43220 463 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 GSSP48637 474 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 HMGA2P52926 109 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SLC18A1P54219 525 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 MTCP1P56278 107 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 MTPNP58546 118 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 KRTAP10-1P60331 282 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 CKAP4Q07065 602 aaKnown RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SCN1BQ07699 218 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SF3A3Q12874 501 aaKnown RBP eCLIP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 TSPAN31Q12999 210 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 MED21Q13503 144 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 CDK5R1Q15078 307 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 PTGES3Q15185 160 aaKnown RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 PSG5Q15238 335 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 MICAQ29983 383 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 KLK9Q2XQG4 91 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ODF3L2Q3SX64 289 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SLC22A6Q4U2R8 563 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 MORN2Q502X0 79 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 IFI44LQ53G44 452 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SLC25A30Q5SVS4 291 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 RSBN1Q5VWQ0 802 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 METTL21CQ5VZV1 264 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ELP2Q6IA86 826 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 FAM71F2Q6NXP2 309 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF767PQ75MW2 155 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF554Q86TJ5 538 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF679Q8IYX0 411 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 BATF2Q8N1L9 274 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 C17orf53Q8N3J3 647 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 NECAP1Q8NC96 275 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 OR8J3Q8NGG0 315 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 OR52L2PQ8NGH6 319 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 OR5AN1Q8NGI8 311 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 OR1L1Q8NH94 360 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 CNIH3Q8TBE1 160 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms