RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 LRTM2Q8N967 370 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 OR10Z1Q8NGY1 313 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 USB1Q9BQ65 265 aaKnown RBP14.73□□□□□ -0.05
CNOT3-209ENST00000617930 TUBG2Q9NRH3 451 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 CCL28Q9NRJ3 127 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 OR14J1Q9UGF5 321 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 METRNQ9UJH8 293 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 RNASEK-C17orf49H0YIS7 233 aa14.72□□□□□ -0.05
CNOT3-209ENST00000617930 SFTA3P0C7M3 94 aa14.72□□□□□ -0.05
CNOT3-209ENST00000617930 TMEM33P57088 247 aa14.72□□□□□ -0.05
CNOT3-209ENST00000617930 HLA-DRB3P79483 266 aa14.72□□□□□ -0.05
CNOT3-209ENST00000617930 LIAT1Q6ZQX7 453 aa14.72□□□□□ -0.05
CNOT3-209ENST00000617930 PLEKHA2Q9HB19 425 aa14.72□□□□□ -0.05
CNOT3-209ENST00000617930 PARP11Q9NR21 331 aa14.72□□□□□ -0.05
CNOT3-209ENST00000617930 JKAMPQ9P055 326 aa14.72□□□□□ -0.05
CNOT3-209ENST00000617930 AGPAT2O15120 278 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 PHF1O43189 567 aaPredicted RBP14.71□□□□□ -0.05
CNOT3-209ENST00000617930 PTBP3O95758 552 aaKnown RBP14.71□□□□□ -0.05
CNOT3-209ENST00000617930 HAND1O96004 215 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 F2RL1P55085 397 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 CABLES2Q9BTV7 478 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 ZFP57Q9NU63 452 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 TREM2Q9NZC2 230 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 DUSP13Q9UII6 198 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 TRGV8A0A0C4DH27 118 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 TMEM8BA6NDV4 472 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 E5RGE8 158 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 IGLV2-14P01704 120 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 SPIN3Q5JUX0 258 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 SHEQ5VZ18 495 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 FAM53AQ6NSI3 398 aaPredicted RBP14.71□□□□□ -0.05
CNOT3-209ENST00000617930 BTNL8Q6UX41 500 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 ACP7Q6ZNF0 438 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 TBC1D26Q86UD7 250 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 H1FOOQ8IZA3 346 aaPredicted RBP14.71□□□□□ -0.05
CNOT3-209ENST00000617930 ST6GALNAC3Q8NDV1 305 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 SUCNR1Q9BXA5 334 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 PARP12Q9H0J9 701 aaKnown RBP14.71□□□□□ -0.05
CNOT3-209ENST00000617930 NSG2Q9Y328 171 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 ARID1AO14497 2285 aa14.71□□□□□ -0.05
CNOT3-209ENST00000617930 HEATR1Q9H583 2144 aaKnown RBP14.71□□□□□ -0.06
CNOT3-209ENST00000617930 C3orf85A0A1B0GTC6 90 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 HSD17B6O14756 317 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 SH2D1BO14796 132 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 LMO1P25800 156 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 IQCF2Q8IXL9 164 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 TMEM171Q8WVE6 324 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 MBNL3Q9NUK0 354 aaKnown RBP14.7□□□□□ -0.06
CNOT3-209ENST00000617930 IGSF10Q6WRI0 2623 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 A6NLC8 198 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.7□□□□□ -0.06
CNOT3-209ENST00000617930 H7C1Q1 480 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 ATXN7O15265 892 aaPredicted RBP14.7□□□□□ -0.06
CNOT3-209ENST00000617930 DIRAS3O95661 229 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 MBPP02686 304 aaPredicted RBP14.7□□□□□ -0.06
CNOT3-209ENST00000617930 EGR1P18146 543 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 CD80P33681 288 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 CDSNQ15517 529 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 TESK1Q15569 626 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 MRGPRGQ86SM5 289 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 OR2Z1Q8NG97 314 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 OR52M1Q8NGK5 317 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 LILRB1Q8NHL6 650 aaPredicted RBP14.7□□□□□ -0.06
CNOT3-209ENST00000617930 IL1F10Q8WWZ1 152 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 VKORC1Q9BQB6 163 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 SYT3Q9BQG1 590 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 WIPI2Q9Y4P8 454 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 POMT1Q9Y6A1 747 aa14.7□□□□□ -0.06
CNOT3-209ENST00000617930 BORCS7-ASMTA0A0B4J1R7 106 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.69□□□□□ -0.06
CNOT3-209ENST00000617930 TNFSF12O43508 249 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 CTXN2P0C2S0 81 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 CA7P43166 264 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 RBPJQ06330 500 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 VHLLQ6RSH7 139 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 PRR18Q8N4B5 295 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 SLC35G3Q8N808 338 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 TMEM222Q9H0R3 208 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 ERRFI1Q9UJM3 462 aaPredicted RBP14.69□□□□□ -0.06
CNOT3-209ENST00000617930 FBXO9Q9UK97 447 aaPredicted RBP14.69□□□□□ -0.06
CNOT3-209ENST00000617930 CFAP46Q8IYW2 2715 aa14.69□□□□□ -0.06
CNOT3-209ENST00000617930 IGHV3-13P01766 116 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 NFYBP25208 207 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 GLRXP35754 106 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 MDH2P40926 338 aaKnown RBP14.68□□□□□ -0.06
CNOT3-209ENST00000617930 RND3P61587 244 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 CLEC9AQ6UXN8 241 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 LINC00518Q8N0U6 118 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 CCDC71LQ8N9Z2 235 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 UBAC2Q8NBM4 344 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 ERGIC1Q969X5 290 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 MUCL1Q96DR8 90 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 COQ2Q96H96 371 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 FAM212BQ9NTI7 297 aaPredicted RBP14.68□□□□□ -0.06
CNOT3-209ENST00000617930 OR2W1Q9Y3N9 320 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 GPR137BO60478 399 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 CRYAAP02489 173 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 DVL1P1P54792 670 aaPredicted RBP14.68□□□□□ -0.06
CNOT3-209ENST00000617930 C3orf36Q3SXR2 165 aa14.68□□□□□ -0.06
CNOT3-209ENST00000617930 MEX3BQ6ZN04 569 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms