RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 C1orf123Q9NWV4 160 aa14.29□□□□□ -0.12
TRAPPC3-209ENST00000616395 MCRIP1C9JLW8 97 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 OR7C1O76099 320 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 H2AFB2P0C5Z0 115 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 PTHLHP12272 177 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 SPNP16150 400 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 BCL3P20749 454 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 TMEM50BP56557 158 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 KCNJ8Q15842 424 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 ATAD3CQ5T2N8 411 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 SCGB3A2Q96PL1 93 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 RIMS4Q9H426 269 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 GPN1Q9HCN4 374 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 KPTNQ9Y664 436 aa14.28□□□□□ -0.12
TRAPPC3-209ENST00000616395 A0A0A6YYD4 124 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 IGKV1-12A0A0C4DH73 117 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 hCG_1807616A0A1W2PRN6 198 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 MEIS3P1A6NDR6 274 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 LGALS8O00214 317 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 NPFFO15130 113 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 FBXO24O75426 580 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 NXPH2O95156 264 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 PTBP3O95758 552 aaKnown RBP14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 IGKV1D-12P01611 117 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 CD28P10747 220 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 AMY2BP19961 511 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 DTYMKP23919 212 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 DLX1P56177 255 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 RAB25P57735 213 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 PLA1AQ53H76 456 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 SPIN3Q5JUX0 258 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 OR5H2Q8NGV7 314 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 OR4K15Q8NH41 348 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 NEK7Q8TDX7 302 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 NUDCD2Q8WVJ2 157 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 ERGIC1Q969X5 290 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 FN3KRPQ9HA64 309 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 SIRT7Q9NRC8 400 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 ONECUT1Q9UBC0 465 aa14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 RPUSD1Q9UJJ7 312 aaKnown RBP14.27□□□□□ -0.12
TRAPPC3-209ENST00000616395 ADARB2-AS1A8MUL3 147 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 H3BUX3 64 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 DVL1O14640 695 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 SH2D1BO14796 132 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 GEMIN2O14893 280 aaKnown RBP14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 NOS1APO75052 506 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 CD74P04233 296 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 CD3DP04234 171 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 AMY2AP04746 511 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 CD33P20138 364 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 CHATP28329 748 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 ARPC4P59998 168 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 IKZF1Q13422 519 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 PLAC9Q5JTB6 97 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 HOGA1Q86XE5 327 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 NDUFA11Q86Y39 141 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 PNKDQ8N490 385 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 OR4C16Q8NGL9 310 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 CCDC107Q8WV48 283 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 ST8SIA4Q92187 359 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 B9D2Q9BPU9 175 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 CHMP1AQ9HD42 196 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 NUDT15Q9NV35 164 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 RASL12Q9NYN1 266 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 MTCH1Q9NZJ7 389 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 RNF7Q9UBF6 113 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 DNAJB11Q9UBS4 358 aa14.26□□□□□ -0.13
TRAPPC3-209ENST00000616395 IGHV3OR15-7A0A075B7D8 119 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 FOXI3A8MTJ6 420 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 NDUFB6O95139 128 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 GYPAP02724 150 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 TRAPPC2P0DI81 140 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 TRAPPC2BP0DI82 140 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 NAT1P18440 290 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 SAA4P35542 130 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 ECI1P42126 302 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 KRTAP10-11P60412 298 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 KLRD1Q13241 179 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 LY6EQ16553 131 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 PIGYQ3MUY2 71 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 C6orf201Q7Z4U5 140 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 FGFRL1Q8N441 504 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 ARRDC1Q8N5I2 433 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 POC1AQ8NBT0 407 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 WFDC9Q8NEX5 89 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 BEST4Q8NFU0 473 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 OR10Z1Q8NGY1 313 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 C12orf4Q9NQ89 552 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 MGAT4AQ9UM21 535 aa14.25□□□□□ -0.13
TRAPPC3-209ENST00000616395 CDIPTO14735 213 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 DEGS1O15121 323 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 NDUFA2O43678 99 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 SYNGR1O43759 233 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 PEX14O75381 377 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 PGA5P0DJD9 388 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 HLA-DMAP28067 261 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 NPBWR2P48146 333 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 GMFBP60983 142 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 TSPAN5P62079 268 aa14.24□□□□□ -0.13
TRAPPC3-209ENST00000616395 SMIM21Q3B7S5 101 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms