RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RYDENQ9NUL5 291 aaKnown RBP4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 MAP1LC3B2A6NCE7 125 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 CLDN34H7C241 214 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 NKX2-8O15522 239 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 NEURL1O76050 574 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 CSRP1P21291 193 aaKnown RBP4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 POM121L2Q96KW2 1035 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 LYZL4Q96KX0 146 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 RHOVQ96L33 236 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 MAP1LC3BQ9GZQ8 125 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 A0A1W2PPE2 198 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 SRSF10O75494 262 aaKnown RBP4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 NQO2P16083 231 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 SSTP61278 116 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 PPP1CBP62140 327 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 BAXQ07812 192 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 ZNF154Q13106 437 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 SLC25A40Q8TBP6 338 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 CIB3Q96Q77 187 aaPredicted RBP4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 PNRC2Q9NPJ4 139 aaKnown RBP4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 BPTFQ12830 3046 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 C9orf172C9J069 976 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 PPP5D1E7EU14 171 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 HKR1P10072 659 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 LINC01559Q495D7 138 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 ZADH2Q8N4Q0 377 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 TMEM105Q8N8V8 129 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 TMEM54Q969K7 222 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 PROCRQ9UNN8 238 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 PSG11Q9UQ72 335 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 THADAQ6YHU6 1953 aa4.84□□□□□ -1.63
SYNCRIP-204ENST00000616122 PLXND1Q9Y4D7 1925 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 M0R1X1 148 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 HMGB3O15347 200 aaKnown RBP4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 FGF16O43320 207 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 DEDDO75618 318 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 IGHV3-13P01766 116 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 IGHV3-7P01780 117 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 SPP1P10451 314 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 DEFB109BQ30KR1 87 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF826PQ6ZT77 177 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 DEFB124Q8NES8 71 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 TP53RKQ96S44 253 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 FAM117AQ9C073 453 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 RPRMQ9NS64 109 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 MTCH1Q9NZJ7 389 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 CACFD1Q9UGQ2 172 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 HELZP42694 1942 aaKnown RBP4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 PCNX3Q9H6A9 2034 aa4.84□□□□□ -1.64
SYNCRIP-204ENST00000616122 A0A1W2PPQ1 181 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 RBFOX3A6NFN3 312 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 RRP8O43159 456 aaKnown RBP4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 MT-CO2P00403 227 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 IRF2P14316 349 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 BCL3P20749 454 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 KITLGP21583 273 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 GPR12P47775 334 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 HGFACQ04756 655 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 NRN1LQ496H8 165 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 ATP1A1-AS1Q5TC04 95 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 ABLIM2Q6H8Q1 611 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 HIST2H3AQ71DI3 136 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 PRSS50Q9UI38 385 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF883P0CG24 379 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 RPS2P15880 293 aaKnown RBP4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 SELEP16581 610 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 BMP5P22003 454 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 PTAFRP25105 342 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 PSMB3P49720 205 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 RAB13P51153 203 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM187Q14656 261 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 IL36RNQ9UBH0 155 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 HECTD1Q9ULT8 2610 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 PLXNA4Q9HCM2 1894 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 DBX1A6NMT0 343 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 CYB5BO43169 146 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 NUDT3O95989 172 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 GZMHP20718 246 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 HLA-DRB3P79483 266 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 SLC38A11Q08AI6 406 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 DDA1Q9BW61 102 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF665Q9H7R5 613 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 USP24Q9UPU5 2620 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 A0A0U1RQK1 487 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 DEFB108AA8MXU0 73 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 E9PLN8 166 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 TNFSF4P23510 183 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF816Q0VGE8 651 aaPredicted RBP4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 Q3ZCU0 254 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 C4orf17Q53FE4 359 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR52M1Q8NGK5 317 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 C1QTNF5Q9BXJ0 243 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 REG4Q9BYZ8 158 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 XIRP2A4UGR9 3374 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 GBF1Q92538 1859 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 IGHV3-43A0A0B4J1X8 118 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 DUXBA0A1W2PPF3 345 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 F8VVB4 439 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 F8VWA3 439 aa4.83□□□□□ -1.64
SYNCRIP-204ENST00000616122 MKRN2OSH3BPM6 223 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms