RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DPTQ07507 201 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 SMN1Q16637 294 aaKnown RBP11.1□□□□□ -0.63
TCF4-248ENST00000616053 OR10G8Q8NGN5 311 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 OGG1O15527 345 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 CLDN14O95500 239 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 CST2P09228 141 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 CCL4P13236 92 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 LCN2P80188 198 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 SLC25A28Q96A46 364 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 ZNF446Q9NWS9 450 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 LRP12Q9Y561 859 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 SNRPCP09234 159 aaKnown RBP11.09□□□□□ -0.63
TCF4-248ENST00000616053 RPS4XP62701 263 aaKnown RBP11.09□□□□□ -0.63
TCF4-248ENST00000616053 MAP1LC3AQ9H492 121 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 IGHV1OR21-1A0A087WYE8 117 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 PMELP40967 661 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 ZNF707Q96C28 371 aaPredicted RBP11.09□□□□□ -0.63
TCF4-248ENST00000616053 PRSS27Q9BQR3 290 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
TCF4-248ENST00000616053 TMEM70Q9BUB7 260 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 AUNIPQ9H7T9 357 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 SETBP1Q9Y6X0 1596 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 PFN3P60673 137 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 ERVK11-1P61568 191 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 DCAF10Q5QP82 559 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 CMC2Q9NRP2 79 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 ZDBF2Q9HCK1 2354 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 G3V2L1 256 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 TMEM170BQ5T4T1 132 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 DRAXINQ8NBI3 349 aaPredicted RBP11.09□□□□□ -0.63
TCF4-248ENST00000616053 SPSB2Q99619 263 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 ABCA6Q8N139 1617 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 MPZL1O95297 269 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 SOD3P08294 240 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 PHYHIPLQ96FC7 376 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 ABLIM3O94929 683 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 PTBP1P26599 531 aaKnown RBP eCLIP11.09□□□□□ -0.633e-7■■■■□ 25
TCF4-248ENST00000616053 CRIM1Q9NZV1 1036 aa11.09□□□□□ -0.63
TCF4-248ENST00000616053 CEACAM18A8MTB9 384 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 PDCD6O75340 191 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 CD3DP04234 171 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 SRSF4Q08170 494 aaKnown RBP11.08□□□□□ -0.64
TCF4-248ENST00000616053 TUBD1Q9UJT1 453 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 A0A1W2PQM1 296 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 TMEM210A6NLX4 147 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 EPPINO95925 133 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 COL10A1Q03692 680 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 KIF26BQ2KJY2 2108 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 RAB24Q969Q5 203 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 IGHV5-51A0A0C4DH38 117 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 C11orf94C9JXX5 98 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 NDUFA2O43678 99 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 B4GALT3O60512 393 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 TAPBPO15533 448 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 TEPPQ6URK8 271 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 LINC01560Q8TB33 94 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 ATG2BQ96BY7 2078 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 IGHV1OR15-9A0A0B4J2B8 117 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 MIDNQ504T8 468 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 ARHGAP5-AS1Q96IT6 56 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 TYROBPO43914 113 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 NAT2P11245 290 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 LDLRAD2Q5SZI1 272 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 ZNF385CQ66K41 422 aaPredicted RBP11.08□□□□□ -0.64
TCF4-248ENST00000616053 RNF165Q6ZSG1 346 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 MRPL24Q96A35 216 aaKnown RBP11.08□□□□□ -0.64
TCF4-248ENST00000616053 NTN4Q9HB63 628 aa11.08□□□□□ -0.64
TCF4-248ENST00000616053 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
TCF4-248ENST00000616053 PATE3B3GLJ2 98 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 ERVS71-1P61550 626 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 FAAP20Q6NZ36 180 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 DLEU7Q6UYE1 221 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 VSTM2LQ96N03 204 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 FOXD3Q9UJU5 478 aaPredicted RBP11.07□□□□□ -0.64
TCF4-248ENST00000616053 TRAV30A0A087WSZ9 112 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 E9PQ18 207 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 GDF9O60383 454 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 SAP30O75446 220 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 JPT2Q9H910 190 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 TRIOBPQ9H2D6 2365 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 CKS1BP61024 79 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 HEATR5AQ86XA9 2040 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 PIKFYVEQ9Y2I7 2098 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 LIPFP07098 398 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 SUMO4Q6EEV6 95 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 OR2V2Q96R30 315 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 PLEKHB1Q9UF11 243 aaPredicted RBP11.07□□□□□ -0.64
TCF4-248ENST00000616053 OPN4Q9UHM6 478 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 INS-IGF2F8WCM5 200 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 INSP01308 110 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 EIF3GO75821 320 aaKnown RBP eCLIP11.07□□□□□ -0.64
TCF4-248ENST00000616053 DAPP51397 102 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 DPPA3Q6W0C5 159 aa11.07□□□□□ -0.64
TCF4-248ENST00000616053 DLX4Q92988 240 aaPredicted RBP11.07□□□□□ -0.64
TCF4-248ENST00000616053 MBNL2Q5VZF2 373 aaKnown RBP11.06□□□□□ -0.64
TCF4-248ENST00000616053 ZDHHC22Q8N966 263 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 CYS1Q717R9 158 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 TREX1Q9NSU2 369 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 TMEM106BQ9NUM4 274 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms