RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 TRBV6-7A0A0A0MS04 114 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 IGKV1-6A0A0C4DH72 117 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 A0A1B0GX30 115 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 LANCL1O43813 399 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 YPEL1O60688 119 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 LOXL3P58215 753 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 KRTAP1-1Q07627 177 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 BAK1Q16611 211 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 Q3ZCU0 254 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 TOMM5Q8N4H5 51 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 TEX29Q8N6K0 151 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 OR52L2PQ8NGH6 319 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 UPRTQ96BW1 309 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 YPEL2Q96QA6 119 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 TBX15Q96SF7 602 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 SUCNR1Q9BXA5 334 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 TEX15Q9BXT5 2789 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 IGHV3-43A0A0B4J1X8 118 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 ANKRD20A5PA0PJZ0 165 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 PMP2P02689 132 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 CD3DP04234 171 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 IGHV3-43DP0DP04 118 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 HRH1P35367 487 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 CEACAM6P40199 344 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 HERPUD1Q15011 391 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 MORN2Q502X0 79 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 RNASE10Q5GAN6 216 aaKnown RBP12.02□□□□□ -0.48
CD48-203ENST00000613788 ABHD12Q8N2K0 398 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 DEDD2Q8WXF8 326 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 TNFRSF14Q92956 283 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 TRIM63Q969Q1 353 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 YAE1D1Q9NRH1 226 aa12.02□□□□□ -0.48
CD48-203ENST00000613788 ZNF469Q96JG9 3925 aaPredicted RBP12.02□□□□□ -0.49
CD48-203ENST00000613788 ABCA2Q9BZC7 2435 aa12.02□□□□□ -0.49
CD48-203ENST00000613788 A8MV72 311 aaPredicted RBP12.01□□□□□ -0.49
CD48-203ENST00000613788 TOR1AO14656 332 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 IFNA6P05013 189 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 AKAIN1P0CW23 69 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 OR5H8P0DN80 308 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 IL7P13232 177 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 CD34P28906 385 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 RFX2P48378 723 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 PRRX1P54821 245 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 LY6G6FQ5SQ64 297 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 ZNF57Q68EA5 555 aaPredicted RBP12.01□□□□□ -0.49
CD48-203ENST00000613788 STEAP1BQ6NZ63 245 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 OVCH2Q7RTZ1 564 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 OR10V1Q8NGI7 309 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 OR9G1Q8NH87 305 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 EDARADDQ8WWZ3 215 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 LHX4Q969G2 390 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 CLEC7AQ9BXN2 247 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 TOLLIPQ9H0E2 274 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 EHFQ9NZC4 300 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 OR1A1Q9P1Q5 309 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 ZNF69Q9UC07 566 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 IGHV2-26A0A0B4J1V2 119 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 J3QRK9 145 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 RAB3DO95716 219 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 LY6G6DO95868 133 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 AVPP01185 164 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 CD74P04233 296 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 HOXB4P17483 251 aaPredicted RBP12.01□□□□□ -0.49
CD48-203ENST00000613788 COX7A1P24310 79 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 FAUP35544 74 aaKnown RBP12.01□□□□□ -0.49
CD48-203ENST00000613788 PPP1CCP36873 323 aaKnown RBP12.01□□□□□ -0.49
CD48-203ENST00000613788 UBE2E1P51965 193 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 DLX1P56177 255 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 TSPAN5P62079 268 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 DYRK1AQ13627 763 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 MEF2DQ14814 521 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 VAX1Q5SQQ9 334 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 TMEM17Q86X19 198 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 PNKDQ8N490 385 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 C8orf31Q8N9H6 132 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 OR11H6Q8NGC7 330 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 ZNF596Q8TC21 504 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 RDH8Q9NYR8 311 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 PSG11Q9UQ72 335 aa12.01□□□□□ -0.49
CD48-203ENST00000613788 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12□□□□□ -0.49
CD48-203ENST00000613788 FLNAP21333 2647 aaKnown RBP12□□□□□ -0.49
CD48-203ENST00000613788 FAM172BPA6NC97 362 aa12□□□□□ -0.49
CD48-203ENST00000613788 RNASEK-C17orf49H0YIS7 233 aa12□□□□□ -0.49
CD48-203ENST00000613788 ITGB1BP1O14713 200 aa12□□□□□ -0.49
CD48-203ENST00000613788 GNMTQ14749 295 aa12□□□□□ -0.49
CD48-203ENST00000613788 GPR157Q5UAW9 335 aa12□□□□□ -0.49
CD48-203ENST00000613788 DHRS11Q6UWP2 260 aa12□□□□□ -0.49
CD48-203ENST00000613788 CLEC9AQ6UXN8 241 aa12□□□□□ -0.49
CD48-203ENST00000613788 H1FOOQ8IZA3 346 aaPredicted RBP12□□□□□ -0.49
CD48-203ENST00000613788 OR2AK2Q8NG84 335 aa12□□□□□ -0.49
CD48-203ENST00000613788 OR6F1Q8NGZ6 308 aa12□□□□□ -0.49
CD48-203ENST00000613788 NANPQ8TBE9 248 aa12□□□□□ -0.49
CD48-203ENST00000613788 GIMAP1Q8WWP7 306 aa12□□□□□ -0.49
CD48-203ENST00000613788 LEAP2Q969E1 77 aa12□□□□□ -0.49
CD48-203ENST00000613788 SMR3AQ99954 134 aa12□□□□□ -0.49
CD48-203ENST00000613788 ABCA1O95477 2261 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 CENPVL3A0A0U1RRI6 287 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 J3QR06 171 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 M0QYG6 137 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 IGHV3-7P01780 117 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms