RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 DUSP5Q16690 384 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ADAD2Q8NCV1 583 aaKnown RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 OR9G4Q8NGQ1 327 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM167BQ9NRX6 74 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 TRPM6Q9BX84 2022 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SLC35E2P0CK97 266 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ALKBH3Q96Q83 286 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SERINC4A6NH21 518 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 FFAR1O14842 300 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 CA11O75493 328 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 TSPAN13O95857 204 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SELEP16581 610 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SPG11Q96JI7 2443 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 GDF9O60383 454 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 FUT5Q11128 374 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 CYP2G1PQ6ZSU1 146 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 BATF2Q8N1L9 274 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ISG15P05161 165 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 CCL23P55773 120 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 DAPP1Q9UN19 280 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 UFC1Q9Y3C8 167 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ONECUT2O95948 504 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SLC35B1P78383 322 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 MEF2CQ06413 473 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SCGB1D4Q6XE38 83 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 RPEQ96AT9 228 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF414Q96IQ9 312 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 OBSL1O75147 1896 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 A0A0U1RQS6 177 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 F8W1H4 67 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ZIC2O95409 532 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 GPR75O95800 540 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 MDKP21741 143 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 RNF175Q8N4F7 328 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SLC52A3Q9NQ40 469 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 CACNG4Q9UBN1 327 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ANKHD1Q8IWZ3 2542 aaKnown RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 FEZF1A0PJY2 475 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 NMUP48645 174 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 CALHM1Q8IU99 346 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 UBALD2Q8IYN6 164 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 CA13Q8N1Q1 262 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SLC35A4Q96G79 324 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SPHK2Q9NRA0 654 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SSUH2Q9Y2M2 353 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 DSPPQ9NZW4 1301 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 CCL15-CCL14A0A0B4J2E2 113 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 C1QTNF9BB2RNN3 333 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 KLRC4-KLRK1H3BQV0 150 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 APLNRP35414 380 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 CYB561P49447 251 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 MORN3Q6PF18 240 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 C16orf54Q6UWD8 224 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 TCF23Q7RTU1 214 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 RNASE8Q8TDE3 154 aaKnown RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SCN10AQ9Y5Y9 1956 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 A0A1W2PPE3 182 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 HCRTO43612 131 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 CEACAM16Q2WEN9 425 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SP6Q3SY56 376 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 FAM219BQ5XKK7 198 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 UNQ5815/PRO19632Q6UWF5 114 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 C12orf76Q8N812 135 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM56Q96MV1 263 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SF3B5Q9BWJ5 86 aaKnown RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 OBP2BQ9NPH6 170 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 C5AR2Q9P296 337 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 B4GALT2O60909 372 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 OR4C13Q8NGP0 309 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 OR10D3Q8NH80 312 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 ZGRF1Q86YA3 2104 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 C9orf172C9J069 976 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 NR2C2APQ86WQ0 139 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 CACNA1GO43497 2377 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SRIP30626 198 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 PSG3Q16557 428 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SUSD3Q96L08 255 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 PTRH2Q9Y3E5 179 aaKnown RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 PRSS56P0CW18 603 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 BHLHA15Q7RTS1 189 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 OR8A1Q8NGG7 326 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 RNF126Q9BV68 326 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SLC25A22Q9H936 323 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 MT-CO3P00414 261 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 FAM157BP0CG42 384 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 TNFRSF4P43489 277 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 PLGLAQ15195 96 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 PLPP4Q5VZY2 271 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF324BQ6AW86 544 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 INSL5Q9Y5Q6 135 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 KBTBD11-OT1A0A1B0GTJ5 212 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF324O75467 553 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-213ENST00000613099 CBLN1P23435 193 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 TCEAL8Q8IYN2 117 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 Q96M85 177 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 C3orf85A0A1B0GTC6 90 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 SELPP16109 830 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 MFAP5Q13361 173 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 ASB10Q8WXI3 467 aa4.35□□□□□ -1.71
VPS13D-213ENST00000613099 WNT10AQ9GZT5 417 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms