RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 RTBDNQ9BSG5 229 aaPredicted RBP9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 HES4Q9HCC6 221 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 TECRQ9NZ01 308 aaKnown RBP9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 TRAV17A0A0B4J275 112 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 F8VVB4 439 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 F8VWA3 439 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 SPRY3O43610 288 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 SCTP09683 121 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 TNFRSF1AP19438 455 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 GNB1P62873 340 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 GABRA6Q16445 453 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 RIPPLY2Q5TAB7 128 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 OR1K1Q8NGR3 316 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 ARRDC1-AS1Q9H2J1 176 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 DMRT1Q9Y5R6 373 aa9.45□□□□□ -0.9
CDC42EP3-206ENST00000611976 H0YL77 283 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 PGLYRP1O75594 196 aaPredicted RBP9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 LYZL6O75951 148 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF735P0CB33 412 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 GZMHP20718 246 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 MEF2BQ02080 365 aaPredicted RBP9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 KCNMB1Q16558 191 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 FNDC7Q5VTL7 733 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 GALNT14Q96FL9 552 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 RARRES2Q99969 163 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 RSG1Q9BU20 258 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 HIF1ANQ9NWT6 349 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF835Q9Y2P0 537 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 C17orf51A8MQB3 221 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 FAM90A26D6RGX4 464 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 FGF16O43320 207 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 BMP5P22003 454 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 MAGEA5P43359 124 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 ALKBH6Q3KRA9 238 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 ASPHD2Q6ICH7 369 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 ETFRF1Q6IPR1 90 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 OR1L4Q8NGR5 311 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 SLC23A3Q6PIS1 610 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 CEP290O15078 2479 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 HIKESHIQ53FT3 197 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 OR2M7Q8NG81 312 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 MEGF10Q96KG7 1140 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 TXNDC17Q9BRA2 123 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 VWA8A3KMH1 1905 aa9.44□□□□□ -0.9
CDC42EP3-206ENST00000611976 DBX1A6NMT0 343 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 VAMP3Q15836 100 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 GLRX5Q86SX6 157 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 PRDM14Q9GZV8 571 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 TCAPO15273 167 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 GCGP01275 180 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 DMWDQ09019 674 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF665Q9H7R5 613 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 IGKV1D-43A0A0B4J1Z2 117 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 PRRG2O14669 202 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 GLIPR1P48060 266 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 AMTP48728 403 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 HES1Q14469 280 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 GPR146Q96CH1 333 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 C21orf140B9A014 251 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 MT-CO3P00414 261 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 HLA-DRB5Q30154 266 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF506Q5JVG8 444 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 OR5AU1Q8NGC0 362 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 FGF11Q92914 225 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 TMEM204Q9BSN7 226 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 GAL3ST2Q9H3Q3 398 aa9.43□□□□□ -0.9
CDC42EP3-206ENST00000611976 A0A087WV48 116 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 TGIF2-C20orf24A0A0A6YYL0 155 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 FGF5P12034 268 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 FHITP49789 147 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 GNG10P50151 68 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 PAX5Q02548 391 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 FBXW9Q5XUX1 488 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 RNASEKQ6P5S7 137 aaKnown RBP9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 OR1L6Q8NGR2 347 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 TAF15Q92804 592 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 LSM10Q969L4 123 aaKnown RBP9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 RNF126Q9BV68 326 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 PKIBQ9C010 78 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 DOK5Q9P104 306 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 TIMM9Q9Y5J7 89 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 MPDU1O75352 247 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 OPRK1P41145 380 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 LBHQ53QV2 105 aaPredicted RBP9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 LRRC10Q5BKY1 277 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 STUMQ69YW2 141 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF488Q96MN9 340 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 REG4Q9BYZ8 158 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 TUBA4BQ9H853 241 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 CLN8Q9UBY8 286 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 FZR1Q9UM11 496 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 TRAV39A0A0B4J263 110 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 A0A1W2PR77 199 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 SPINK4O60575 86 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 TOX4O94842 621 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 SP1P08047 785 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 SPTBP11277 2137 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 KLF3P57682 345 aaPredicted RBP9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 TINAGQ9UJW2 476 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 NLRC5Q86WI3 1866 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms