RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 WFDC3Q8IUB2 231 aa13.59□□□□□ -0.23
TNXB-208ENST00000611016 TPRX1Q8N7U7 411 aa13.59□□□□□ -0.23
TNXB-208ENST00000611016 C5orf17Q8NAS9 161 aa13.59□□□□□ -0.23
TNXB-208ENST00000611016 OR4C5Q8NGB2 326 aa13.59□□□□□ -0.23
TNXB-208ENST00000611016 OR10D4PQ8NGN7 298 aa13.59□□□□□ -0.23
TNXB-208ENST00000611016 TXNDC17Q9BRA2 123 aa13.59□□□□□ -0.23
TNXB-208ENST00000611016 PITX3O75364 302 aa13.58□□□□□ -0.23
TNXB-208ENST00000611016 SLC35E3Q7Z769 313 aa13.58□□□□□ -0.23
TNXB-208ENST00000611016 PCM1Q15154 2024 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 CTSBP07858 339 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 SULT1A2P50226 295 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 GZMMP51124 257 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 TEX30Q5JUR7 227 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 SSMEM1Q8WWF3 244 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 AP4M1O00189 453 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 TTRP02766 147 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 FDX2Q6P4F2 183 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 RBPMS2Q6ZRY4 209 aaKnown RBP13.58□□□□□ -0.24
TNXB-208ENST00000611016 FOXJ2Q9P0K8 574 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 DAOP14920 347 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 CRISP2P16562 243 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 ERVFRD-1P60508 538 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 EWSR1Q01844 656 aaKnown RBP eCLIP13.58□□□□□ -0.24
TNXB-208ENST00000611016 LILRB1Q8NHL6 650 aaPredicted RBP13.58□□□□□ -0.24
TNXB-208ENST00000611016 WNT2BQ93097 391 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 RAB24Q969Q5 203 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 ZNF714Q96N38 554 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 CHODLQ9H9P2 273 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 HILPDAQ9Y5L2 63 aa13.58□□□□□ -0.24
TNXB-208ENST00000611016 KCNMB1Q16558 191 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 TMEM30BQ3MIR4 351 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 TMEM116Q8NCL8 245 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 OR4D10Q8NGI6 311 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 PRSS27Q9BQR3 290 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 HDHD3Q9BSH5 251 aaPredicted RBP13.57□□□□□ -0.24
TNXB-208ENST00000611016 OPN4Q9UHM6 478 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 IGHV3-21A0A0B4J1V1 117 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 CDRT15L2A8MXV6 281 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 PAFAH1B2P68402 229 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 TEPPQ6URK8 271 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 BVESQ8NE79 360 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 RABAC1Q9UI14 185 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 TMEM218A2RU14 115 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 IZUMO4Q1ZYL8 232 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 DGAT2L7PQ6IED9 249 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 ZNF519Q8TB69 540 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 ZNF596Q8TC21 504 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 COL11A1P12107 1806 aaPredicted RBP13.57□□□□□ -0.24
TNXB-208ENST00000611016 ISLRO14498 428 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 HPRT1P00492 218 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 CEACAM21Q3KPI0 293 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 OR8I2Q8N0Y5 310 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 GPX7Q96SL4 187 aaPredicted RBP13.57□□□□□ -0.24
TNXB-208ENST00000611016 BET1LQ9NYM9 111 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 LOC101059948A0A1B0GTJ6 334 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 LNP1A1A4G5 178 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 MFNGO00587 321 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 RBM11P57052 281 aaKnown RBP13.57□□□□□ -0.24
TNXB-208ENST00000611016 ITLN1Q8WWA0 313 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 SF3B6Q9Y3B4 125 aaKnown RBP13.57□□□□□ -0.24
TNXB-208ENST00000611016 UFC1Q9Y3C8 167 aa13.57□□□□□ -0.24
TNXB-208ENST00000611016 ARFGEF1Q9Y6D6 1849 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 PSG5Q15238 335 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 VAX1Q5SQQ9 334 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 LINC00052Q96N35 136 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 PSG2P11465 335 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 CEBPEQ15744 281 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 FAM181AQ8N9Y4 354 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 OR4P4Q8NGL7 312 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 ZCCHC14Q8WYQ9 949 aaKnown RBP13.56□□□□□ -0.24
TNXB-208ENST00000611016 ST6GALNAC2Q9UJ37 374 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 LEUTXA8MZ59 168 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 MPDU1O75352 247 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 NPY1RP25929 384 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 PMS2P11Q13670 270 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 HLA-DRB5Q30154 266 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 FAM24BQ8N5W8 94 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 MAP1LC3CQ9BXW4 147 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 HSPB8Q9UJY1 196 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 CORTO00230 105 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 SMPD2O60906 423 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 NAT2P11245 290 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 SEZ6L2Q6UXD5 910 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 MRPL24Q96A35 216 aaKnown RBP13.56□□□□□ -0.24
TNXB-208ENST00000611016 MIXL1Q9H2W2 232 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 MYO16Q9Y6X6 1858 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 LRP11Q86VZ4 500 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 OR4X1Q8NH49 305 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 PGLYRP3Q96LB9 341 aa13.56□□□□□ -0.24
TNXB-208ENST00000611016 A0A1W2PR77 199 aa13.55□□□□□ -0.24
TNXB-208ENST00000611016 K7N7A8 449 aa13.55□□□□□ -0.24
TNXB-208ENST00000611016 M0QZK8 103 aa13.55□□□□□ -0.24
TNXB-208ENST00000611016 M0R2Z0 102 aa13.55□□□□□ -0.24
TNXB-208ENST00000611016 GGCTO75223 188 aaKnown RBP13.55□□□□□ -0.24
TNXB-208ENST00000611016 KIR3DL2P43630 455 aa13.55□□□□□ -0.24
TNXB-208ENST00000611016 ZNF273Q14593 569 aa13.55□□□□□ -0.24
TNXB-208ENST00000611016 RSPO4Q2I0M5 234 aaPredicted RBP13.55□□□□□ -0.24
TNXB-208ENST00000611016 ADIPOR1Q96A54 375 aa13.55□□□□□ -0.24
TNXB-208ENST00000611016 MFSD2BA6NFX1 497 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms