RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 MARCH1Q8TCQ1 289 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 ZNF480Q8WV37 535 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 TSEN15Q8WW01 171 aaKnown RBP4.39□□□□□ -1.71
SSX9-202ENST00000608568 TMEM230Q96A57 120 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 SLAMF6Q96DU3 332 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 OR10C1Q96KK4 312 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 ALG12Q9BV10 488 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 OR10A5Q9H207 317 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 CST9LQ9H4G1 147 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 MKKSQ9NPJ1 570 aaPredicted RBP4.39□□□□□ -1.71
SSX9-202ENST00000608568 DECR2Q9NUI1 292 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 MRM2Q9UI43 246 aaKnown RBP4.39□□□□□ -1.71
SSX9-202ENST00000608568 AK3Q9UIJ7 227 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 DHDHQ9UQ10 334 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 PSG11Q9UQ72 335 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 PTRH2Q9Y3E5 179 aaKnown RBP4.39□□□□□ -1.71
SSX9-202ENST00000608568 URGCP-MRPS24S4R325 110 aa4.39□□□□□ -1.71
SSX9-202ENST00000608568 LOC105371242A0A075B767 164 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 DUXBA0A1W2PPF3 345 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 A1L4Q6 167 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 MEIS3P1A6NDR6 274 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 OR5B21A6NL26 309 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 H7BYZ3 331 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 ST8SIA3O43173 380 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 NDUFS4O43181 175 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 KLF7O75840 302 aaPredicted RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 ZNF205O95201 554 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 CDS2O95674 445 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 BCL2P10415 239 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 ERGP11308 486 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 HIST1H1CP16403 213 aaKnown RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 ALOX5APP20292 161 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 COL8A1P27658 744 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 DUSP1P28562 367 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 OTX2P32243 289 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 PPP1CCP36873 323 aaKnown RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 GABRA2P47869 451 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 SOX2P48431 317 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 RAB28P51157 221 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 CCL11P51671 97 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 HNRNPA3P51991 378 aaKnown RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 FGF8P55075 233 aaPredicted RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 SUPT4H1P63272 117 aaKnown RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 ROM1Q03395 351 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 CNN3Q15417 329 aaKnown RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 PMCHL1Q16048 86 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 EXT1Q16394 746 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 SMIM21Q3B7S5 101 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 ANKRD55Q3KP44 614 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 ALG10Q5BKT4 473 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 LRRC10Q5BKY1 277 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 CT83Q5H943 113 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 FAM90A2PQ658T7 463 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 OR4C11Q6IEV9 310 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 FAM71F2Q6NXP2 309 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 KCTD18Q6PI47 426 aaPredicted RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 LINC00114Q6XXX2 140 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 SHISA6Q6ZSJ9 500 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 FAM214BQ7L5A3 538 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 ZNF550Q7Z398 422 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 MRGPRGQ86SM5 289 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 LYPD6Q86Y78 171 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 KMT5CQ86Y97 462 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 BATF2Q8N1L9 274 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 OR2C3Q8N628 320 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 OR5D18Q8NGL1 313 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 OR5H2Q8NGV7 314 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 OR2G3Q8NGZ4 309 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 OR2T10Q8NGZ9 312 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 CMTM2Q8TAZ6 248 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 MBD3L1Q8WWY6 194 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 TMEM234Q8WY98 164 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 C11orf40Q8WZ69 217 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 GPR146Q96CH1 333 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 PGAM5Q96HS1 289 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 RAX2Q96IS3 184 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 Q96M85 177 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 TMEM56Q96MV1 263 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 TXN2Q99757 166 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 SPIN2AQ99865 258 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 SPIN2BQ9BPZ2 258 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 MACROD1Q9BQ69 325 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 RTBDNQ9BSG5 229 aaPredicted RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 OR51I2Q9H344 312 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 RBM7Q9Y580 266 aaKnown RBP4.38□□□□□ -1.71
SSX9-202ENST00000608568 LIPGQ9Y5X9 500 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 TMEM56-RWDD3S4R434 201 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 ROS1P08922 2347 aa4.38□□□□□ -1.71
SSX9-202ENST00000608568 NIPBLQ6KC79 2804 aaeCLIP4.37□□□□□ -1.71
SSX9-202ENST00000608568 ARID1AO14497 2285 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 SAA2-SAA4A0A096LPE2 208 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 TRBV9A0A0B4J1U6 114 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 A0A0J9YY10 115 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 A0A1W2PPV9 198 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 ANKUB1A6NFN9 424 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 CRYM-AS1A6NIL9 109 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 CORTO00230 105 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 SIRPB1O00241 398 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 PRICKLE3O43900 615 aaPredicted RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 FGF17O60258 216 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms