RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 FAM166BA8MTA8 275 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 HIDE1A8MVS5 230 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 J3QLW9 94 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 CCL24O00175 119 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 TRAF3IP2O43734 574 aaPredicted RBP4.06□□□□□ -1.76
LINC01109-201ENST00000603837 SMIM10L2AP0DMW4 78 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 SMIM10L2BP0DMW5 78 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 CXCL8P10145 99 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 KITLGP21583 273 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 CCKBRP32239 447 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 GPR1P46091 355 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 TPPP2P59282 170 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 UBE2NP61088 152 aaKnown RBP4.06□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF92Q03936 586 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF415Q09FC8 603 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 TMEM267Q0VDI3 215 aaPredicted RBP4.06□□□□□ -1.76
LINC01109-201ENST00000603837 LTC4SQ16873 150 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 TMEM128Q5BJH2 165 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 LRRC10Q5BKY1 277 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 ACTL10Q5JWF8 245 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 MBOAT2Q6ZWT7 520 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 H2BFWTQ7Z2G1 175 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 TGIF2LYQ8IUE0 185 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 CYB561D1Q8N8Q1 229 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 OR6N2Q8NGY6 317 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF563Q8TA94 476 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 FNDC9Q8TBE3 224 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 SLAMF6Q96DU3 332 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 PGLYRP3Q96LB9 341 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 NXF5Q9H1B4 397 aaKnown RBP4.06□□□□□ -1.76
LINC01109-201ENST00000603837 C1orf123Q9NWV4 160 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 MED29Q9NX70 200 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 B4GALT7Q9UBV7 327 aa4.06□□□□□ -1.76
LINC01109-201ENST00000603837 TRIOBPQ9H2D6 2365 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 A0A1W2PPV9 198 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 IGLC7A0M8Q6 106 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 P2RX6O15547 441 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 KLK1P06870 262 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 TSPOP30536 169 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 NKX2-1P43699 371 aaPredicted RBP4.05□□□□□ -1.76
LINC01109-201ENST00000603837 CLDN2P57739 230 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 TBPL1P62380 186 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 RPEL1Q2QD12 228 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 CLEC12AQ5QGZ9 265 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 Q6ZSR3 168 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 Q6ZWC4 215 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 SLC25A42Q86VD7 318 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 KLHDC1Q8N7A1 406 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 OR13G1Q8NGZ3 307 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 FAM213BQ8TBF2 198 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 STARD4Q96DR4 205 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 TRIB3Q96RU7 358 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 CST11Q9H112 138 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 HINT3Q9NQE9 182 aaKnown RBP4.05□□□□□ -1.76
LINC01109-201ENST00000603837 PRR13Q9NZ81 148 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 ETV7Q9Y603 341 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 WSB1Q9Y6I7 421 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 A0A1W2PS29 197 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 MAP1LC3B2A6NCE7 125 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 NPIPB11E5RHQ5 1161 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 CLDN5O00501 218 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 TAX1BP3O14907 124 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 REG1AP05451 166 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 SEC11BP0C7V7 166 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 HIST1H1EP10412 219 aaKnown RBP4.05□□□□□ -1.76
LINC01109-201ENST00000603837 CR2P20023 1033 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 RPS4Y1P22090 263 aaKnown RBP4.05□□□□□ -1.76
LINC01109-201ENST00000603837 CTRLP40313 264 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF83P51522 516 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 PCBP3P57721 371 aaKnown RBP4.05□□□□□ -1.76
LINC01109-201ENST00000603837 EWSR1Q01844 656 aaKnown RBP eCLIP4.05□□□□□ -1.76
LINC01109-201ENST00000603837 PNRC1Q12796 327 aaPredicted RBP4.05□□□□□ -1.76
LINC01109-201ENST00000603837 C3AR1Q16581 482 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 UPP1Q16831 310 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 DMKNQ6E0U4 476 aaPredicted RBP4.05□□□□□ -1.76
LINC01109-201ENST00000603837 MRGPREQ86SM8 312 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 TMEM256Q8N2U0 113 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 OR4K1Q8NGD4 311 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 CMTM2Q8TAZ6 248 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 RPEQ96AT9 228 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 BTF3L4Q96K17 158 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 DERL1Q9BUN8 251 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 EBPLQ9BY08 206 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 MAP1LC3BQ9GZQ8 125 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 SH2D2AQ9NP31 389 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 JPT1Q9UK76 154 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 V9GY05 133 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 CCDC88CQ9P219 2028 aa4.05□□□□□ -1.76
LINC01109-201ENST00000603837 TMEM213A2RRL7 107 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 FAM72CH0Y354 149 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 C1QL1O75973 258 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ORM1P02763 201 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 MAS1P04201 325 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 CD99P14209 185 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 RPL35AP18077 110 aaKnown RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 EDNRAP25101 427 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 PYCR1P32322 319 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 PRSS3P35030 304 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 APOBEC1P41238 236 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms