RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PSMG3Q9BT73 122 aaPredicted RBP4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 OR11A1Q9GZK7 315 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 SLC35B3Q9H1N7 401 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 KCNJ16Q9NPI9 418 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF586Q9NXT0 402 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 LOXL2Q9Y4K0 774 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 TRBV24-1A0A075B6N3 115 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A1B0GTI1 187 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 TMEM272A0A1B0GTI8 110 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A1B0GW64 132 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 IRGMA1A4Y4 181 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 SERINC4A6NH21 518 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 H3BTX0 84 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 H7BYZ3 331 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 M0R129 80 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 SLC17A3O00476 420 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 XKRYO14609 159 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 YPEL1O60688 119 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 TBX6O95947 436 aaPredicted RBP4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 OPN1SWP03999 348 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 OR4Q2P0C623 313 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 SMIM10L2AP0DMW4 78 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 SMIM10L2BP0DMW5 78 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 VSIG10L2P0DP72 767 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 AADACP22760 399 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 GATA3P23771 443 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 LPAR6P43657 344 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 GLIPR1P48060 266 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 SULT1A2P50226 295 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 RND2P52198 227 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 ARG2P78540 354 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 GAGE5Q13069 117 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 GAGE6Q13070 117 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 CBLL1Q75N03 491 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 GKN2Q86XP6 184 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 MSRB3Q8IXL7 192 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 PNKDQ8N490 385 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 GPR119Q8TDV5 335 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 TSACCQ96A04 125 aaPredicted RBP4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 YPEL2Q96QA6 119 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 IMMP2LQ96T52 175 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 MS4A6AQ9H2W1 248 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 OR52D1Q9H346 318 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 FNDC4Q9H6D8 234 aaPredicted RBP4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 FUT9Q9Y231 359 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 RAI2Q9Y5P3 530 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 SNX11Q9Y5W9 270 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 TSC2P49815 1807 aa4.25□□□□□ -1.73
SPTBN1-206ENST00000602898 NUP210LQ5VU65 1888 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A0A6YYD5 115 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A0B4J2E0 115 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A0G2JLL6 359 aaPredicted RBP4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A1B0GX12 115 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 HSD17B6O14756 317 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 CNMDO75829 334 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF682O95780 498 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 HLA-AP01891 365 aaKnown RBP4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 GP9P14770 177 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 GNB3P16520 340 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 CMPK1P30085 196 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 PPIFP30405 207 aaKnown RBP4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 GABRA3P34903 492 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 TAS2R43P59537 309 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 MFGE8Q08431 387 aaPredicted RBP4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 FZD2Q14332 565 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 P2RY6Q15077 328 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 MS4A18Q3C1V0 323 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 LINC00303Q3SY05 128 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 C1orf189Q5VU69 101 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 WDR74Q6RFH5 385 aaPredicted RBP4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 TMEM184AQ6ZMB5 413 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 NEGR1Q7Z3B1 354 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 CALHM3Q86XJ0 350 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 DOLPP1Q86YN1 238 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 CLDN19Q8N6F1 224 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 OR2T27Q8NH04 317 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 OR4X1Q8NH49 305 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 PTX4Q96A99 478 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 GALMQ96C23 342 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 MS4A6EQ96DS6 147 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 SIGLEC12Q96PQ1 595 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 APOOQ9BUR5 198 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 SCRT1Q9BWW7 348 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 TMEM242Q9NWH2 141 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 MED29Q9NX70 200 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 BPTFQ12830 3046 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 SMIM28A0A1B0GU29 152 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 ARL5CA6NH57 179 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 FAM166BA8MTA8 275 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 B4DEV8 164 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 ETV2O00321 342 aaPredicted RBP4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 PIRO00625 290 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 SPINT2O43291 252 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 OR1I1O60431 355 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 DUS4LO95620 317 aaKnown RBP4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 ELANEP08246 267 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 PVRP15151 417 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 PGCP20142 388 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 ALOX5APP20292 161 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 ARL2P36404 184 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms