RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 PARP11Q9NR21 331 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 MRPS28Q9Y2Q9 187 aaKnown RBP7.47□□□□□ -1.21
VRK3-224ENST00000601849 PEX16Q9Y5Y5 336 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 WSB1Q9Y6I7 421 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 DNAH7Q8WXX0 4024 aa7.46□□□□□ -1.21
VRK3-224ENST00000601849 C12orf77C9JDV5 145 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 E9PI62 339 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 LINC01619G3V211 115 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 I3L521 148 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 HBZP02008 142 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 MYL12AP19105 171 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 DCKP27707 260 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 PPIFP30405 207 aaKnown RBP7.46□□□□□ -1.22
VRK3-224ENST00000601849 GTF2A1P52655 376 aaPredicted RBP7.46□□□□□ -1.22
VRK3-224ENST00000601849 ACTBP60709 375 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 LSAMPQ13449 338 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 PLGLAQ15195 96 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 CT45A1Q5HYN5 189 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 RAB12Q6IQ22 244 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 PYHIN1Q6K0P9 492 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 ZNF554Q86TJ5 538 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 TCTEX1D1Q8N7M0 179 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 OR52I1Q8NGK6 324 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 OR4K15Q8NH41 348 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 CT45A3Q8NHU0 189 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 DCUN1D4Q92564 292 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 GALMQ96C23 342 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 FLYWCH2Q96CP2 140 aaKnown RBP7.46□□□□□ -1.22
VRK3-224ENST00000601849 OR5B12Q96R08 314 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 C9orf16Q9BUW7 83 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 ELOVL1Q9BW60 279 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 ISYNA1Q9NPH2 558 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 MRPS18AQ9NVS2 196 aaKnown RBP7.46□□□□□ -1.22
VRK3-224ENST00000601849 BABAM2Q9NXR7 383 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 JPT1Q9UK76 154 aa7.46□□□□□ -1.22
VRK3-224ENST00000601849 LOC100130705A0A1B0GUX0 176 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 FAM90A10PA6NDY2 464 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 FAM90A7PA6NKC0 464 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 FAM90A23PA8MXZ1 464 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 NBR2O15453 112 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 IGLV1-40P01703 118 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 HLA-DRB1P01911 266 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 OR8U9P0C7N5 309 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 GP9P14770 177 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 FUT3P21217 361 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 ZNF134P52741 427 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 HTD2P86397 168 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 PITPNAQ00169 270 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 MORN2Q502X0 79 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 YIF1BQ5BJH7 314 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 ZNF660Q6AZW8 331 aaPredicted RBP7.45□□□□□ -1.22
VRK3-224ENST00000601849 GLIPR1L1Q6UWM5 242 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 SBSPONQ8IVN8 264 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 CDH26Q8IXH8 852 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 CBR4Q8N4T8 237 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 JAGN1Q8N5M9 183 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 ZNF555Q8NEP9 628 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 OR2AK2Q8NG84 335 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 ABHD5Q8WTS1 349 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 PYDC1Q8WXC3 89 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 ABHD14AQ9BUJ0 271 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 SELENOIQ9C0D9 397 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 KLK15Q9H2R5 256 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 GNB4Q9HAV0 340 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 TAF9BQ9HBM6 251 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 FGF20Q9NP95 211 aaPredicted RBP7.45□□□□□ -1.22
VRK3-224ENST00000601849 ABRACLQ9P1F3 81 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 STEAP1Q9UHE8 339 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 HUWE1Q7Z6Z7 4374 aaKnown RBP7.45□□□□□ -1.22
VRK3-224ENST00000601849 RYR2Q92736 4967 aa7.45□□□□□ -1.22
VRK3-224ENST00000601849 A0A1W2PN81 502 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 G3V318 75 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 EBAG9O00559 213 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 LDLRAD4O15165 306 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 ATP6V0E1O15342 81 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 SLC31A2O15432 143 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 YPEL1O60688 119 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 GPX5O75715 221 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 GSTP1P09211 210 aaKnown RBP7.44□□□□□ -1.22
VRK3-224ENST00000601849 FRMD6-AS1P0C7T7 363 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 SPNP16150 400 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 GABRB1P18505 474 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 MC5RP33032 325 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 CHRNA7P36544 502 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 CAPGP40121 348 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 VHLP40337 213 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 C5orf64Q2M2E5 130 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 Q499Y3 187 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 AWAT2Q6E213 333 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 OVCH2Q7RTZ1 564 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 ANKRD13BQ86YJ7 626 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 ZNF439Q8NDP4 499 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 OR1L1Q8NH94 360 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 MYOZ3Q8TDC0 251 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 THRSPQ92748 146 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 GHSRQ92847 366 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 SMIM19Q96E16 107 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 YPEL2Q96QA6 119 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 ANKRD60Q9BZ19 345 aa7.44□□□□□ -1.22
VRK3-224ENST00000601849 PIPOXQ9P0Z9 390 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms