RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 FUT3P21217 361 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 SOX6P35712 828 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 DGCR2P98153 550 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 LYPD6Q86Y78 171 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 PRR18Q8N4B5 295 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 OR10V1Q8NGI7 309 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 OR1L1Q8NH94 360 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 DERL3Q96Q80 235 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 SELENOIQ9C0D9 397 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 OR2S2Q9NQN1 319 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCAF1-204ENST00000601038 C8orf4Q9NR00 106 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 ZNF580Q9UK33 172 aa13.32□□□□□ -0.28
SCAF1-204ENST00000601038 LANCL1O43813 399 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 RAMP3O60896 148 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 IGHG4P01861 327 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 IGF1P05019 195 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 CD1AP06126 327 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 CAPGP40121 348 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 RAB25P57735 213 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 ADARB1P78563 741 aaKnown RBP13.31□□□□□ -0.28
SCAF1-204ENST00000601038 CFHR3Q02985 330 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 DOC2BQ14184 412 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 LRRC36Q1X8D7 754 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 MORN2Q502X0 79 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 SIGIRRQ6IA17 410 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 LCNL1Q6ZST4 164 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 ZNF554Q86TJ5 538 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 DHRSXQ8N5I4 330 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 PACRGLQ8N7B6 248 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 Q96M66 194 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 HSPB9Q9BQS6 159 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 TAF9BQ9HBM6 251 aa13.31□□□□□ -0.28
SCAF1-204ENST00000601038 MBNL3Q9NUK0 354 aaKnown RBP13.31□□□□□ -0.28
SCAF1-204ENST00000601038 PNMA8CA0A1B0GUJ8 204 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 EFCAB10A6NFE3 127 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 CRTAPO75718 401 aaPredicted RBP13.3□□□□□ -0.28
SCAF1-204ENST00000601038 CELP19835 753 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 VDAC1P21796 283 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 LSAMPQ13449 338 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 DEFB136Q30KP8 78 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 NKAIN3Q8N8D7 197 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 OR5M8Q8NGP6 311 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 THRSPQ92748 146 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 TFAP2CQ92754 450 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 RBMXL1Q96E39 390 aaKnown RBP13.3□□□□□ -0.28
SCAF1-204ENST00000601038 CHCHD6Q9BRQ6 235 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 UQCC2Q9BRT2 126 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 KCNIP1Q9NZI2 227 aa13.3□□□□□ -0.28
SCAF1-204ENST00000601038 CNOT2Q9NZN8 540 aaKnown RBP13.3□□□□□ -0.28
SCAF1-204ENST00000601038 UBE2QL1A1L167 161 aa13.29□□□□□ -0.28
SCAF1-204ENST00000601038 OR5H8P0DN80 308 aa13.29□□□□□ -0.28
SCAF1-204ENST00000601038 PSMB8P28062 276 aa13.29□□□□□ -0.28
SCAF1-204ENST00000601038 C4orf3Q8WVX3 66 aa13.29□□□□□ -0.28
SCAF1-204ENST00000601038 KCTD7Q96MP8 289 aa13.29□□□□□ -0.28
SCAF1-204ENST00000601038 GHRLQ9UBU3 117 aa13.29□□□□□ -0.28
SCAF1-204ENST00000601038 ZNF107Q9UII5 783 aaPredicted RBP13.29□□□□□ -0.28
SCAF1-204ENST00000601038 JPT1Q9UK76 154 aa13.29□□□□□ -0.28
SCAF1-204ENST00000601038 PDCD6O75340 191 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 MAPK3P27361 379 aaPredicted RBP13.28□□□□□ -0.28
SCAF1-204ENST00000601038 WNT4P56705 351 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 HTD2P86397 168 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 MMDQ15546 238 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 C9orf66Q5T8R8 295 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 MRPL30Q8TCC3 161 aaKnown RBP13.28□□□□□ -0.28
SCAF1-204ENST00000601038 WWC2-AS2Q96NR7 200 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 ABHD14AQ9BUJ0 271 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 CST11Q9H112 138 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 PSORS1C1Q9UIG5 152 aa13.28□□□□□ -0.28
SCAF1-204ENST00000601038 MYL12BO14950 172 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 YPEL1O60688 119 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 SLC2A2P11168 524 aaPredicted RBP13.27□□□□□ -0.29
SCAF1-204ENST00000601038 LUMP51884 338 aaPredicted RBP13.27□□□□□ -0.29
SCAF1-204ENST00000601038 GNMTQ14749 295 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 LY6G6FQ5SQ64 297 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 ODF3L1Q8IXM7 274 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 C8orf59Q8N0T1 100 aaPredicted RBP13.27□□□□□ -0.29
SCAF1-204ENST00000601038 OR52L2PQ8NGH6 319 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 MYOZ3Q8TDC0 251 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 FAM46BQ96A09 425 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 CYYR1Q96J86 154 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 YPEL2Q96QA6 119 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 PLCXD1Q9NUJ7 323 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 LRRC42Q9Y546 428 aa13.27□□□□□ -0.29
SCAF1-204ENST00000601038 RGS11O94810 467 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 GNAO1P09471 354 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 PPIFP30405 207 aaKnown RBP13.26□□□□□ -0.29
SCAF1-204ENST00000601038 PPP1CCP36873 323 aaKnown RBP13.26□□□□□ -0.29
SCAF1-204ENST00000601038 ACTBP60709 375 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 FHL3Q13643 280 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 C6orf141Q5SZD1 244 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 AHSA2Q719I0 299 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 NANOGP1Q8N7R0 232 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 FBLIM1Q8WUP2 373 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 GALMQ96C23 342 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 UBE2E2Q96LR5 201 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 NEDD4LQ96PU5 975 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 NABP2Q9BQ15 211 aa13.26□□□□□ -0.29
SCAF1-204ENST00000601038 SCOCQ9UIL1 159 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms