RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 C19orf53Q9UNZ5 99 aaPredicted RBP8.47□□□□□ -1.05
NFKB1-212ENST00000600343 DNAJC25-GNG10A0A024R161 153 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 A0A0G2JMM0 328 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 MDFIC2A0A1B0GVS7 189 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 A0A1W2PPB8 328 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 KIR3DP1A8MWS1 328 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 CXCL11O14625 94 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 GATA2P23769 480 aaPredicted RBP8.46□□□□□ -1.05
NFKB1-212ENST00000600343 ROM1Q03395 351 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 CXorf66Q5JRM2 361 aaPredicted RBP8.46□□□□□ -1.05
NFKB1-212ENST00000600343 CCDC144NLQ6NUI1 221 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 ZAR1Q86SH2 424 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 OR4N5Q8IXE1 308 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 MTURNQ8N3F0 131 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 GJD4Q96KN9 370 aaPredicted RBP8.46□□□□□ -1.05
NFKB1-212ENST00000600343 OR10A2Q9H208 303 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 MBLAC1A4D2B0 266 aaPredicted RBP8.46□□□□□ -1.05
NFKB1-212ENST00000600343 SNURFLB1AK76 121 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 SLC31A1O15431 190 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 MLNRO43193 412 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 C1QTNF9P0C862 333 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 STAG3L2P0CL84 134 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 HNRNPA2B1P22626 353 aaKnown RBP8.46□□□□□ -1.05
NFKB1-212ENST00000600343 PSG4Q00888 419 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 RNF144BQ7Z419 303 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 NEIL1Q96FI4 390 aaPredicted RBP8.46□□□□□ -1.05
NFKB1-212ENST00000600343 GMPPAQ96IJ6 420 aaPredicted RBP8.46□□□□□ -1.05
NFKB1-212ENST00000600343 PSMG3Q9BT73 122 aaPredicted RBP8.46□□□□□ -1.05
NFKB1-212ENST00000600343 PLEK2Q9NYT0 353 aa8.46□□□□□ -1.05
NFKB1-212ENST00000600343 ALPK2Q86TB3 2170 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 LOC101059948A0A1B0GTJ6 334 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 GAGE12HA6NDE8 117 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 HMGB3O15347 200 aaKnown RBP8.46□□□□□ -1.06
NFKB1-212ENST00000600343 EOMESO95936 686 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 ISG15P05161 165 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 IER3P46695 156 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 PSEN2P49810 448 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 ADAT3Q96EY9 351 aaPredicted RBP8.46□□□□□ -1.06
NFKB1-212ENST00000600343 RCHY1Q96PM5 261 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 SPIN2AQ99865 258 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 SPIN2BQ9BPZ2 258 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 TSSC4Q9Y5U2 329 aaPredicted RBP8.46□□□□□ -1.06
NFKB1-212ENST00000600343 DOCK11Q5JSL3 2073 aa8.46□□□□□ -1.06
NFKB1-212ENST00000600343 C1QTNF9BB2RNN3 333 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 KLRC4-KLRK1H3BQV0 150 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 REG1AP05451 166 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 ZNF17P17021 662 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 OR3A4PP47883 348 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 PRTGQ2VWP7 1150 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 OR5D14Q8NGL3 314 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 PHF7Q9BWX1 381 aaPredicted RBP8.45□□□□□ -1.06
NFKB1-212ENST00000600343 SAA2-SAA4A0A096LPE2 208 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 LRP5LA4QPB2 252 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 H0YJW9 148 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 ZNF207O43670 478 aaKnown RBP8.45□□□□□ -1.06
NFKB1-212ENST00000600343 PDE6DO43924 150 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 SERPINE2P07093 398 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 BLVRBP30043 206 aaPredicted RBP8.45□□□□□ -1.06
NFKB1-212ENST00000600343 GABRA6Q16445 453 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 CD300EQ496F6 205 aaPredicted RBP8.45□□□□□ -1.06
NFKB1-212ENST00000600343 ASTLQ6HA08 431 aaPredicted RBP8.45□□□□□ -1.06
NFKB1-212ENST00000600343 LRRC75AQ8NAA5 344 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 OR5P3Q8WZ94 311 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 FER1L6-AS2Q96M78 137 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 GPER1Q99527 375 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 SGIP1Q9BQI5 828 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 HINT2Q9BX68 163 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 NPFFR1Q9GZQ6 430 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 RNF181Q9P0P0 153 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 NPIPA5E9PKD4 350 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 NPIPA3F8WFD2 350 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 K7EP34 96 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 TMEM50AO95807 157 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 TIMP3P35625 211 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 CA7P43166 264 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 PPOXP50336 477 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 RHOBP62745 196 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 NOGQ13253 232 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 ACSF3Q4G176 576 aaPredicted RBP8.45□□□□□ -1.06
NFKB1-212ENST00000600343 GATAD1Q8WUU5 269 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 BLNKQ8WV28 456 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 HIF1ANQ9NWT6 349 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 NPIPA1Q9UND3 350 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 ZNF850A8MQ14 1090 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 TGFBR3Q03167 851 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 IGFBP7Q16270 282 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 CTXN3Q4LDR2 81 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 EMC4Q5J8M3 183 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 ZNF324BQ6AW86 544 aaPredicted RBP8.45□□□□□ -1.06
NFKB1-212ENST00000600343 SLC25A34Q6PIV7 304 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 OR52N5Q8NH56 324 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 C8orf44Q96CB5 159 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 DAPP1Q9UN19 280 aa8.45□□□□□ -1.06
NFKB1-212ENST00000600343 EDDM13A0A1B0GTR0 161 aa8.44□□□□□ -1.06
NFKB1-212ENST00000600343 LOC102725191A0A1B0GVB3 256 aa8.44□□□□□ -1.06
NFKB1-212ENST00000600343 H3BP45 60 aa8.44□□□□□ -1.06
NFKB1-212ENST00000600343 TSPAN13O95857 204 aa8.44□□□□□ -1.06
NFKB1-212ENST00000600343 RPL18Q07020 188 aaKnown RBP8.44□□□□□ -1.06
NFKB1-212ENST00000600343 RNFT1Q5M7Z0 435 aa8.44□□□□□ -1.06
NFKB1-212ENST00000600343 DECR2Q9NUI1 292 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms