RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 GCSAMQ8N6F7 178 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 OR10Z1Q8NGY1 313 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 SMIM8Q96KF7 97 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 SPACA1Q9HBV2 294 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 PRR13Q9NZ81 148 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 OR14J1Q9UGF5 321 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 PRELID3BQ9Y3B1 194 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 ARFGEF3Q5TH69 2177 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 SRRM5B3KS81 715 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.73□□□□□ -0.37
VRK3-218ENST00000600031 H7C2Y5 167 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 SIRPB1O00241 398 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 SNAPINO95295 136 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 CTSDP07339 412 aaPredicted RBP12.73□□□□□ -0.37
VRK3-218ENST00000600031 CD55P08174 381 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 HOXB5P09067 269 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 RNF224P0DH78 156 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 LDLRAD3Q86YD5 345 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 DIRC2Q96SL1 478 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 TREM1Q9NP99 234 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 GSKIPQ9P0R6 139 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 B9A039 149 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 SLC33A1O00400 549 aaPredicted RBP12.73□□□□□ -0.37
VRK3-218ENST00000600031 SH2D1BO14796 132 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 HAND1O96004 215 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 LHBP01229 141 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 TFF1P04155 84 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 IGFBP2P18065 325 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 DTYMKP23919 212 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 AKR1C2P52895 323 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 AKR1C1Q04828 323 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 GUCA2BQ16661 112 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 DHRS7BQ6IAN0 325 aaPredicted RBP12.73□□□□□ -0.37
VRK3-218ENST00000600031 FIP1L1Q6UN15 594 aaKnown RBP12.73□□□□□ -0.37
VRK3-218ENST00000600031 TGIF2LYQ8IUE0 185 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 OR4A4PQ8NGN8 299 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 NEK7Q8TDX7 302 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 DECR2Q9NUI1 292 aa12.73□□□□□ -0.37
VRK3-218ENST00000600031 FLNCQ14315 2725 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 KNG1P01042 644 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 IFNA21P01568 189 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 HKR1P10072 659 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 S100A10P60903 97 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 RBM39Q14498 530 aaKnown RBP12.72□□□□□ -0.37
VRK3-218ENST00000600031 SMCO1Q147U7 214 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 SWI5Q1ZZU3 235 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 SMIM21Q3B7S5 101 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 MUC15Q8N387 334 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 TAF9BQ9HBM6 251 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 DYNLRB1Q9NP97 96 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 OR2S2Q9NQN1 319 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 UQCC1Q9NVA1 299 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 DYSFO75923 2080 aa12.72□□□□□ -0.37
VRK3-218ENST00000600031 IAH1Q2TAA2 248 aaPredicted RBP12.71□□□□□ -0.37
VRK3-218ENST00000600031 FAM201AQ5SY85 155 aa12.71□□□□□ -0.37
VRK3-218ENST00000600031 IQCF2Q8IXL9 164 aa12.71□□□□□ -0.37
VRK3-218ENST00000600031 FAM222BQ8WU58 562 aa12.71□□□□□ -0.37
VRK3-218ENST00000600031 ZNF2Q9BSG1 426 aaPredicted RBP12.71□□□□□ -0.37
VRK3-218ENST00000600031 DCAF16Q9NXF7 216 aa12.71□□□□□ -0.37
VRK3-218ENST00000600031 CRYM-AS1A6NIL9 109 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 NAPSAO96009 420 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 GLAP06280 429 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 SULT1A2P50226 295 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 CAV2P51636 162 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 SRSF3P84103 164 aaKnown RBP12.71□□□□□ -0.38
VRK3-218ENST00000600031 ERGIC1Q969X5 290 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 MS4A5Q9H3V2 200 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 RNF7Q9UBF6 113 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 ANXA10Q9UJ72 324 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 RALYQ9UKM9 306 aaKnown RBP12.71□□□□□ -0.38
VRK3-218ENST00000600031 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.38
VRK3-218ENST00000600031 HRNRQ86YZ3 2850 aaPredicted RBP12.7□□□□□ -0.38
VRK3-218ENST00000600031 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 PSPNO60542 156 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 CYB5R3P00387 301 aaPredicted RBP12.7□□□□□ -0.38
VRK3-218ENST00000600031 GAPDHP04406 335 aaKnown RBP12.7□□□□□ -0.38
VRK3-218ENST00000600031 PSG2P11465 335 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 TNFRSF1AP19438 455 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 LMO1P25800 156 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 RPL12P30050 165 aaKnown RBP12.7□□□□□ -0.38
VRK3-218ENST00000600031 TESK1Q15569 626 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 Q8TCH9 128 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 HRH4Q9H3N8 390 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 KMT2BQ9UMN6 2715 aaPredicted RBP12.7□□□□□ -0.38
VRK3-218ENST00000600031 LRBAP50851 2863 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 USP9XQ93008 2570 aaPredicted RBP12.7□□□□□ -0.38
VRK3-218ENST00000600031 A0A1W2PPR1 153 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 K7EPK0 472 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 DEDDO75618 318 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 JTBO76095 146 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 ZNF205O95201 554 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 PVALBP20472 110 aaPredicted RBP12.7□□□□□ -0.38
VRK3-218ENST00000600031 CD80P33681 288 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 HFEQ30201 348 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 RPL7L1Q6DKI1 246 aaKnown RBP12.7□□□□□ -0.38
VRK3-218ENST00000600031 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
VRK3-218ENST00000600031 FAM71E2Q8N5Q1 922 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms