RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 THNSL2Q86YJ6 484 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 UBALD1Q8TB05 177 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 CCDC107Q8WV48 283 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 CENPOQ9BU64 300 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 CST11Q9H112 138 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 LINC00574Q9H8X3 128 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 VCX3AQ9NNX9 186 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 PSG11Q9UQ72 335 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 PEX16Q9Y5Y5 336 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 A0A0A6YYD4 124 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 TRIM64CA6NLI5 447 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 TMEM14DPA8MWL7 114 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 PDCD5O14737 125 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 BPNT1O95861 308 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 UBBP0CG47 229 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 ARSBP15848 533 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 FGF9P31371 208 aaPredicted RBP14.88□□□□□ -0.03
PNKP-213ENST00000599543 SSTR5P35346 364 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 RAB7AP51149 207 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 C10orf99Q6UWK7 81 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 DRAM1Q8N682 238 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 OR10A7Q8NGE5 316 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 OR10X1Q8NGY0 326 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 RFESDQ8TAC1 157 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 FAM3DQ96BQ1 224 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 YIPF6Q96EC8 236 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 TMEM59Q9BXS4 323 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 GHRLQ9UBU3 117 aa14.88□□□□□ -0.03
PNKP-213ENST00000599543 A0A1W2PPI3 338 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 PSMB11A5LHX3 300 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A18PA6NE21 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A16PA6NEW6 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A20PA6NIJ5 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A9PA6NNJ1 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A12PA8MX19 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A5PA8MXJ8 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 NPIPB11E5RHQ5 1161 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A15PP0C7V4 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A13PP0C7W8 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A14PP0C7W9 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 FAM90A24PP0C7X0 464 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 TMEM11P17152 192 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 GALP22466 123 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 SDC2P34741 201 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 RPS27AP62979 156 aaKnown RBP14.87□□□□□ -0.03
PNKP-213ENST00000599543 C2orf76Q3KRA6 126 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 LINC00596Q86U02 117 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 KCNG3Q8TAE7 436 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 MRPS24Q96EL2 167 aaKnown RBP14.87□□□□□ -0.03
PNKP-213ENST00000599543 RCC1LQ96I51 464 aaKnown RBP14.87□□□□□ -0.03
PNKP-213ENST00000599543 IFT22Q9H7X7 185 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 STEAP1Q9UHE8 339 aa14.87□□□□□ -0.03
PNKP-213ENST00000599543 TMEM272A0A1B0GTI8 110 aa14.86□□□□□ -0.03
PNKP-213ENST00000599543 MCRIP1C9JLW8 97 aa14.86□□□□□ -0.03
PNKP-213ENST00000599543 DIAPH2-AS1Q14236 149 aa14.86□□□□□ -0.03
PNKP-213ENST00000599543 SLC16A12Q6ZSM3 486 aa14.86□□□□□ -0.03
PNKP-213ENST00000599543 C5orf24Q7Z6I8 188 aa14.86□□□□□ -0.03
PNKP-213ENST00000599543 OR8H3Q8N146 312 aa14.86□□□□□ -0.03
PNKP-213ENST00000599543 LPAR5Q9H1C0 372 aa14.86□□□□□ -0.03
PNKP-213ENST00000599543 ETAA1Q9NY74 926 aa14.86□□□□□ -0.03
PNKP-213ENST00000599543 RCC2Q9P258 522 aaKnown RBP14.86□□□□□ -0.03
PNKP-213ENST00000599543 TMEM30CPA0ZSE6 113 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 IFITM5A6NNB3 132 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 SOCS1O15524 211 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 PDCD6O75340 191 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 DUS4LO95620 317 aaKnown RBP14.85□□□□□ -0.03
PNKP-213ENST00000599543 IGKV1D-33P01593 117 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 IGKV1-33P01594 117 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 C6orf201Q7Z4U5 140 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 C5orf56Q8N8D9 126 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 OR4K15Q8NH41 348 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 CHPT1Q8WUD6 406 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 KCTD7Q96MP8 289 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 SULT4A1Q9BR01 284 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 FAAP24Q9BTP7 215 aa14.85□□□□□ -0.03
PNKP-213ENST00000599543 A0A1W2PPE3 182 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 HSD17B6O14756 317 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 FGF16O43320 207 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 AIREO43918 545 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 GZMHP20718 246 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 FUT3P21217 361 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 CHATP28329 748 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 BLVRBP30043 206 aaPredicted RBP14.84□□□□□ -0.03
PNKP-213ENST00000599543 VEGFCP49767 419 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 HNF4GQ14541 408 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 FAM53AQ6NSI3 398 aaPredicted RBP14.84□□□□□ -0.03
PNKP-213ENST00000599543 ZNF497Q6ZNH5 498 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 ZNF329Q86UD4 541 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 DAPK2Q9UIK4 370 aa14.84□□□□□ -0.03
PNKP-213ENST00000599543 SERPINE3A8MV23 424 aa14.83□□□□□ -0.04
PNKP-213ENST00000599543 AIPO00170 330 aa14.83□□□□□ -0.04
PNKP-213ENST00000599543 MT-ND4P03905 459 aa14.83□□□□□ -0.04
PNKP-213ENST00000599543 SNRPBP14678 240 aaKnown RBP14.83□□□□□ -0.04
PNKP-213ENST00000599543 PSMD7P51665 324 aa14.83□□□□□ -0.04
PNKP-213ENST00000599543 OR2W3Q7Z3T1 314 aa14.83□□□□□ -0.04
PNKP-213ENST00000599543 NOL4LQ96MY1 436 aaPredicted RBP14.83□□□□□ -0.04
PNKP-213ENST00000599543 NEDD4LQ96PU5 975 aa14.83□□□□□ -0.04
PNKP-213ENST00000599543 TM2D1Q9BX74 207 aa14.83□□□□□ -0.04
PNKP-213ENST00000599543 SPACA1Q9HBV2 294 aa14.83□□□□□ -0.04
PNKP-213ENST00000599543 FAM90A10PA6NDY2 464 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms