RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 WI2-2373I1.2A0A1W2PRP0 233 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 UBE2QL1A1L167 161 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 LINC01548A6NM66 108 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 ZNF736B4DX44 427 aaPredicted RBP7.71□□□□□ -1.18
VRK3-216ENST00000599342 CCL24O00175 119 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 PDCD6O75340 191 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 SC5DO75845 299 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 RPLP1P05386 114 aaKnown RBP7.71□□□□□ -1.18
VRK3-216ENST00000599342 CD1AP06126 327 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 GLAP06280 429 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 ELANEP08246 267 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 OR5H8P0DN80 308 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 RCC1P18754 421 aaPredicted RBP7.71□□□□□ -1.18
VRK3-216ENST00000599342 MYF6P23409 242 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 SOX6P35712 828 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 GP2P55259 537 aaKnown RBP7.71□□□□□ -1.18
VRK3-216ENST00000599342 CD69Q07108 199 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 FOXE3Q13461 319 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 MMDQ15546 238 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 CT45A1Q5HYN5 189 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 NKAPLQ5M9Q1 402 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 VAX1Q5SQQ9 334 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 STEAP3Q658P3 488 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 GAPTQ8N292 157 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 BPIFB6Q8NFQ5 453 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 OR8U1Q8NH10 309 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 CT45A3Q8NHU0 189 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 FAM46BQ96A09 425 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 Q96M66 194 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 DUX3Q96PT4 197 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 P2RX4Q99571 388 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 ABHD14AQ9BUJ0 271 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 VCXQ9H320 206 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 TAF9BQ9HBM6 251 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 PSORS1C1Q9UIG5 152 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 JPT1Q9UK76 154 aa7.71□□□□□ -1.18
VRK3-216ENST00000599342 LANCL1O43813 399 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 RGS11O94810 467 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 GNAO1P09471 354 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 UBBP0CG47 229 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 SLC2A2P11168 524 aaPredicted RBP7.7□□□□□ -1.18
VRK3-216ENST00000599342 VHLP40337 213 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 ZNF134P52741 427 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 F2RL1P55085 397 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 LSAMPQ13449 338 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 MORN2Q502X0 79 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 ZNF554Q86TJ5 538 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 FAM71E2Q8N5Q1 922 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 OR5M8Q8NGP6 311 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 NEDD4LQ96PU5 975 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 HSPB9Q9BQS6 159 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 MND1Q9BWT6 205 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 DCLRE1BQ9H816 532 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 PLSCR3Q9NRY6 295 aa7.7□□□□□ -1.18
VRK3-216ENST00000599342 MBNL3Q9NUK0 354 aaKnown RBP7.7□□□□□ -1.18
VRK3-216ENST00000599342 ZNF107Q9UII5 783 aaPredicted RBP7.7□□□□□ -1.18
VRK3-216ENST00000599342 NOTCH3Q9UM47 2321 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 H0YHG0 523 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 CDX1P47902 265 aaPredicted RBP7.69□□□□□ -1.18
VRK3-216ENST00000599342 DGCR2P98153 550 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 GABPB1Q06547 395 aaPredicted RBP7.69□□□□□ -1.18
VRK3-216ENST00000599342 GNMTQ14749 295 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 DEFB136Q30KP8 78 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 RBM48Q5RL73 367 aaKnown RBP7.69□□□□□ -1.18
VRK3-216ENST00000599342 GLT8D1Q68CQ7 371 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 SIGIRRQ6IA17 410 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 LCNL1Q6ZST4 164 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 MS4A15Q8N5U1 240 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 NANOGP1Q8N7R0 232 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 OR2AK2Q8NG84 335 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 OR52L2PQ8NGH6 319 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 MRPL30Q8TCC3 161 aaKnown RBP7.69□□□□□ -1.18
VRK3-216ENST00000599342 C4orf3Q8WVX3 66 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 GALMQ96C23 342 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 RAX2Q96IS3 184 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 ZNF251Q9BRH9 671 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 TMEM59Q9BXS4 323 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.69□□□□□ -1.18
VRK3-216ENST00000599342 PLCXD1Q9NUJ7 323 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 ABRACLQ9P1F3 81 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 LRRC42Q9Y546 428 aa7.69□□□□□ -1.18
VRK3-216ENST00000599342 YPEL1O60688 119 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 RAMP3O60896 148 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 IGHG4P01861 327 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 IGF1P05019 195 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 CHATP28329 748 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 PPP1CCP36873 323 aaKnown RBP7.68□□□□□ -1.18
VRK3-216ENST00000599342 ACTBP60709 375 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 HTD2P86397 168 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 CFHR3Q02985 330 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 INSL4Q14641 139 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 KIR2DS1Q14954 304 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 ACSM3Q53FZ2 586 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 C9orf66Q5T8R8 295 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 OGFRL1Q5TC84 451 aaPredicted RBP7.68□□□□□ -1.18
VRK3-216ENST00000599342 LAIR2Q6ISS4 152 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 C11orf87Q6NUJ2 197 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 TMEM65Q6PI78 240 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 LYPD6Q86Y78 171 aa7.68□□□□□ -1.18
VRK3-216ENST00000599342 RNF152Q8N8N0 203 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms